Skip to content

Commit d43c938

Browse files
gbayarrigbayarri
committed
2025.1
1 parent 5b6078a commit d43c938

File tree

8 files changed

+33
-27
lines changed

8 files changed

+33
-27
lines changed

‎README.md‎

Lines changed: 7 additions & 7 deletions
Original file line numberDiff line numberDiff line change
@@ -3,7 +3,7 @@
33
[![](https://img.shields.io/conda/vn/bioconda/biobb_cmip?label=Conda)](https://anaconda.org/bioconda/biobb_cmip)
44
[![](https://img.shields.io/conda/dn/bioconda/biobb_cmip?label=Conda%20Downloads)](https://anaconda.org/bioconda/biobb_cmip)
55
[![](https://img.shields.io/badge/Docker-Quay.io-blue)](https://quay.io/repository/biocontainers/biobb_cmip?tab=tags)
6-
[![](https://img.shields.io/badge/Singularity-GalaxyProject-blue)](https://depot.galaxyproject.org/singularity/biobb_cmip:5.0.0--pyhdfd78af_0)
6+
[![](https://img.shields.io/badge/Singularity-GalaxyProject-blue)](https://depot.galaxyproject.org/singularity/biobb_cmip:5.1.0--pyhdfd78af_0)
77

88
[![](https://img.shields.io/badge/OS-Unix%20%7C%20MacOS-blue)](https://github.com/bioexcel/biobb_cmip)
99
[![](https://img.shields.io/pypi/pyversions/biobb-cmip.svg?label=Python%20Versions)](https://pypi.org/project/biobb-cmip/)
@@ -40,7 +40,7 @@ The latest documentation of this package can be found in our readthedocs site:
4040
[latest API documentation](http://biobb-cmip.readthedocs.io/en/latest/).
4141

4242
### Version
43-
v5.0.0 2024.2
43+
v5.1.0 2025.1
4444

4545
### Installation
4646
Using PIP:
@@ -50,7 +50,7 @@ Using PIP:
5050
* Installation:
5151

5252

53-
pip install "biobb_cmip>=5.0.0"
53+
pip install "biobb_cmip>=5.1.0"
5454

5555

5656
* Usage: [Python API documentation](https://biobb-cmip.readthedocs.io/en/latest/modules.html)
@@ -60,7 +60,7 @@ Using ANACONDA:
6060
* Installation:
6161

6262

63-
conda install -c bioconda "biobb_cmip>=5.0.0"
63+
conda install -c bioconda "biobb_cmip>=5.1.0"
6464

6565

6666
* Usage: With conda installation BioBBs can be used with the [Python API documentation](https://biobb-cmip.readthedocs.io/en/latest/modules.html) and the [Command Line documentation](https://biobb-cmip.readthedocs.io/en/latest/command_line.html)
@@ -70,13 +70,13 @@ Using DOCKER:
7070
* Installation:
7171

7272

73-
docker pull quay.io/biocontainers/biobb_cmip:5.0.0--pyhdfd78af_0
73+
docker pull quay.io/biocontainers/biobb_cmip:5.1.0--pyhdfd78af_0
7474

7575

7676
* Usage:
7777

7878

79-
docker run quay.io/biocontainers/biobb_cmip:5.0.0--pyhdfd78af_0 <command>
79+
docker run quay.io/biocontainers/biobb_cmip:5.1.0--pyhdfd78af_0 <command>
8080

8181

8282
Using SINGULARITY:
@@ -86,7 +86,7 @@ Using SINGULARITY:
8686
* Installation:
8787

8888

89-
singularity pull --name biobb_cmip.sif https://depot.galaxyproject.org/singularity/biobb_cmip:5.0.0--pyhdfd78af_0
89+
singularity pull --name biobb_cmip.sif https://depot.galaxyproject.org/singularity/biobb_cmip:5.1.0--pyhdfd78af_0
9090

9191

9292
* Usage:

‎biobb_cmip/__init__.py‎

Lines changed: 1 addition & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -1,4 +1,4 @@
11
from . import cmip
22
name = "biobb_cmip"
33
__all__ = ["cmip"]
4-
__version__ = "5.0.0"
4+
__version__ = "5.1.0"

‎biobb_cmip/docs/source/change_log.md‎

Lines changed: 6 additions & 0 deletions
Original file line numberDiff line numberDiff line change
@@ -1,5 +1,11 @@
11
# Biobb CMIP changelog
22

3+
## What's new in version [5.1.0](https://github.com/bioexcel/biobb_cmip/releases/tag/v5.1.0)?
4+
5+
### Changes
6+
7+
* [UPDATE] * Update to biobb_common 5.1.0 (general)
8+
39
## What's new in version [5.0.0](https://github.com/bioexcel/biobb_cmip/releases/tag/v5.0.0)?
410

511
### Changes

‎biobb_cmip/docs/source/conf.py‎

Lines changed: 2 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -75,9 +75,9 @@
7575
# built documents.
7676
#
7777
# The short X.Y version.
78-
version = u'5.0.0'
78+
version = u'5.1.0'
7979
# The full version, including alpha/beta/rc tags.
80-
release = u'5.0.0'
80+
release = u'5.1.0'
8181

8282
# The language for content autogenerated by Sphinx. Refer to documentation
8383
# for a list of supported languages.

‎biobb_cmip/docs/source/readme.md‎

Lines changed: 7 additions & 7 deletions
Original file line numberDiff line numberDiff line change
@@ -3,7 +3,7 @@
33
[![](https://img.shields.io/conda/vn/bioconda/biobb_cmip?label=Conda)](https://anaconda.org/bioconda/biobb_cmip)
44
[![](https://img.shields.io/conda/dn/bioconda/biobb_cmip?label=Conda%20Downloads)](https://anaconda.org/bioconda/biobb_cmip)
55
[![](https://img.shields.io/badge/Docker-Quay.io-blue)](https://quay.io/repository/biocontainers/biobb_cmip?tab=tags)
6-
[![](https://img.shields.io/badge/Singularity-GalaxyProject-blue)](https://depot.galaxyproject.org/singularity/biobb_cmip:5.0.0--pyhdfd78af_0)
6+
[![](https://img.shields.io/badge/Singularity-GalaxyProject-blue)](https://depot.galaxyproject.org/singularity/biobb_cmip:5.1.0--pyhdfd78af_0)
77

88
[![](https://img.shields.io/badge/OS-Unix%20%7C%20MacOS-blue)](https://github.com/bioexcel/biobb_cmip)
99
[![](https://img.shields.io/pypi/pyversions/biobb-cmip.svg?label=Python%20Versions)](https://pypi.org/project/biobb-cmip/)
@@ -40,7 +40,7 @@ The latest documentation of this package can be found in our readthedocs site:
4040
[latest API documentation](http://biobb-cmip.readthedocs.io/en/latest/).
4141

4242
### Version
43-
v5.0.0 2024.2
43+
v5.1.0 2025.1
4444

4545
### Installation
4646
Using PIP:
@@ -50,7 +50,7 @@ Using PIP:
5050
* Installation:
5151

5252

53-
pip install "biobb_cmip>=5.0.0"
53+
pip install "biobb_cmip>=5.1.0"
5454

5555

5656
* Usage: [Python API documentation](https://biobb-cmip.readthedocs.io/en/latest/modules.html)
@@ -60,7 +60,7 @@ Using ANACONDA:
6060
* Installation:
6161

6262

63-
conda install -c bioconda "biobb_cmip>=5.0.0"
63+
conda install -c bioconda "biobb_cmip>=5.1.0"
6464

6565

6666
* Usage: With conda installation BioBBs can be used with the [Python API documentation](https://biobb-cmip.readthedocs.io/en/latest/modules.html) and the [Command Line documentation](https://biobb-cmip.readthedocs.io/en/latest/command_line.html)
@@ -70,13 +70,13 @@ Using DOCKER:
7070
* Installation:
7171

7272

73-
docker pull quay.io/biocontainers/biobb_cmip:5.0.0--pyhdfd78af_0
73+
docker pull quay.io/biocontainers/biobb_cmip:5.1.0--pyhdfd78af_0
7474

7575

7676
* Usage:
7777

7878

79-
docker run quay.io/biocontainers/biobb_cmip:5.0.0--pyhdfd78af_0 <command>
79+
docker run quay.io/biocontainers/biobb_cmip:5.1.0--pyhdfd78af_0 <command>
8080

8181

8282
Using SINGULARITY:
@@ -86,7 +86,7 @@ Using SINGULARITY:
8686
* Installation:
8787

8888

89-
singularity pull --name biobb_cmip.sif https://depot.galaxyproject.org/singularity/biobb_cmip:5.0.0--pyhdfd78af_0
89+
singularity pull --name biobb_cmip.sif https://depot.galaxyproject.org/singularity/biobb_cmip:5.1.0--pyhdfd78af_0
9090

9191

9292
* Usage:

‎biobb_cmip/docs/source/schema.html‎

Lines changed: 1 addition & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -10,7 +10,7 @@
1010
"applicationSubCategory": "http://www.edamontology.org/topic_3892",
1111
"citation": "https://www.nature.com/articles/s41597-019-0177-4",
1212
"license": "https://www.apache.org/licenses/LICENSE-2.0",
13-
"softwareVersion": "5.0.0",
13+
"softwareVersion": "5.1.0",
1414
"applicationSuite": "BioBB BioExcel Building Blocks",
1515
"codeRepository": "https://github.com/bioexcel/biobb_cmip",
1616
"isAccessibleForFree": "True",

‎biobb_cmip/json_schemas/biobb_cmip.json‎

Lines changed: 6 additions & 6 deletions
Original file line numberDiff line numberDiff line change
@@ -4,9 +4,9 @@
44
"github": "https://github.com/bioexcel/biobb_cmip",
55
"readthedocs": "https://biobb-cmip.readthedocs.io/en/latest/",
66
"conda": "https://anaconda.org/bioconda/biobb_cmip",
7-
"docker": "https://quay.io/biocontainers/biobb_cmip:5.0.0--pyhdfd78af_0",
8-
"singularity": "https://depot.galaxyproject.org/singularity/biobb_cmip:5.0.0--pyhdfd78af_0",
9-
"version": "5.0.0",
7+
"docker": "https://quay.io/biocontainers/biobb_cmip:5.1.0--pyhdfd78af_0",
8+
"singularity": "https://depot.galaxyproject.org/singularity/biobb_cmip:5.1.0--pyhdfd78af_0",
9+
"version": "5.1.0",
1010
"tools": [
1111
{
1212
"block": "CmipRun",
@@ -45,15 +45,15 @@
4545
}
4646
],
4747
"dep_pypi": [
48-
"install_requires=['biobb_common==5.0.0', 'mdanalysis', 'biobb_structure_checking==3.13.5']",
48+
"install_requires=['biobb_common==5.1.0', 'mdanalysis', 'biobb_structure_checking==3.15.6']",
4949
"python_requires='>=3.9'"
5050
],
5151
"dep_conda": [
5252
"python >=3.9",
53-
"biobb_common ==5.0.0",
53+
"biobb_common ==5.1.0",
5454
"cmip ==2.7.0",
5555
"mdanalysis >=2.0.0",
56-
"biobb_structure_checking==3.13.5"
56+
"biobb_structure_checking==3.15.6"
5757
],
5858
"keywords": [
5959
"classical",

‎setup.py‎

Lines changed: 3 additions & 3 deletions
Original file line numberDiff line numberDiff line change
@@ -5,7 +5,7 @@
55

66
setuptools.setup(
77
name="biobb_cmip",
8-
version="5.0.0",
8+
version="5.1.0",
99
author="Biobb developers",
1010
author_email="[email protected]",
1111
description="biobb_cmip is the Biobb module collection to compute classical molecular interaction potentials.",
@@ -21,9 +21,9 @@
2121
package_data={'biobb_cmip': ['py.typed']},
2222
include_package_data=True,
2323
install_requires=[
24-
'biobb_common==5.0.0',
24+
'biobb_common==5.1.0',
2525
'mdanalysis>=2.0.0',
26-
'biobb_structure_checking==3.13.5'
26+
'biobb_structure_checking==3.15.6'
2727
],
2828
python_requires='>=3.9',
2929
entry_points={

0 commit comments

Comments
 (0)