fix: small fixes for conda template

Author: AidanAbd

CHANGELOG.md

@@ -13,6 +13,13 @@ Types of changes
     *Security* in case of vulnerabilities.
 
 -->
+# Latch SDK Changelog
+
+## 2.19.4 - 2023-05-04
+
+### Fixed
+
+- Conda template registration issue and run in correct environment issue
 
 # Latch SDK Changelog
 

latch_cli/docker_utils/__init__.py

@@ -128,8 +128,6 @@ def infer_commands(pkg_root: Path) -> List[DockerCmdBlock]:
                 commands=[
                     "copy environment.yaml /opt/latch/environment.yaml",
                     f"run conda env create --file /opt/latch/environment.yaml --name {env_name}",
-                    f'shell ["conda", "run", "--name", "{env_name}", "/bin/bash", "-c"]',
-                    "run pip install --upgrade latch",
                 ],
                 order=DockerCmdBlockOrder.precopy,
             ),

latch_cli/services/init/example_conda/conda_task.py

@@ -2,24 +2,26 @@
 
 from latch import small_task
 from latch.types import LatchFile, LatchOutputDir
+from typing import List
 
+def run(command: List[str], check: bool = True, capture_output: bool = False):
+
+    cmd = ["conda", "run", "--name", "example", "/bin/bash", "-c", " ".join(command)]
+
+    return subprocess.run(cmd, check=check, capture_output=capture_output)
 
 # change the name of this function to something more descriptive
 @small_task
 def conda_task(input_file: LatchFile, output_directory: LatchOutputDir) -> LatchFile:
     # You can run conda packages as a subprocess:
 
-    subprocess.run(
-        "".join(
-            [
-                "put",
-                "conda",
-                "command",
-                "here",
-            ]
-        ),
-        check=True,
-        shell=True,
+    run(
+        [
+            "put",
+            "conda",
+            "command",
+            "here",
+        ]
     )
     ...
     output_location = f"{output_directory.remote_directory}/YOUR_OUTPUT_FILE_NAME"

setup.py

@@ -14,7 +14,7 @@
 
 setup(
     name="latch",
-    version="v2.19.3",
+    version="v2.19.4",
     author_email="[email protected]",
     description="The Latchbio SDK",
     packages=find_packages(),