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updated to CRAN version 1.1.6 and replaced .tic with .pkgdown
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‎.github/.gitignore‎

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*.html

‎.github/ISSUE_TEMPLATE/issue_template.md‎

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Please give a brief description of the problem
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Please add your Operating System (e.g., Windows10, Macintosh, Linux) and the R version that you use (e.g., 3.6.2)
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Please add your Operating System (e.g., Windows10, Macintosh, Linux) and the R version that you use (e.g., 4.0.2)

‎.github/dependabot.yml‎

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version: 2
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updates:
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# Monitor Docker dependencies
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- package-ecosystem: "docker"
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directory: "/"
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schedule:
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interval: "monthly"
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open-pull-requests-limit: 3
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reviewers:
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- "mlampros"
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assignees:
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- "mlampros"
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labels:
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- "dependencies"
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- "docker"
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commit-message:
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prefix: "docker"
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include: "scope"
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# Monitor GitHub Actions (if you have any workflows)
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- package-ecosystem: "github-actions"
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directory: "/"
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schedule:
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interval: "monthly"
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open-pull-requests-limit: 5
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reviewers:
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- "mlampros"
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assignees:
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- "mlampros"
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labels:
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- "dependencies"
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- "github-actions"
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commit-message:
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prefix: "ci"
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include: "scope"

‎.github/workflows/R-CMD-check.yaml‎

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# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples
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# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
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on:
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push:
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branches: [main, master]
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pull_request:
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name: R-CMD-check.yaml
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permissions: read-all
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jobs:
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R-CMD-check:
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runs-on: ${{ matrix.config.os }}
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name: ${{ matrix.config.os }} (${{ matrix.config.r }})
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strategy:
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fail-fast: false
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matrix:
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config:
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- {os: macos-latest, r: 'release'}
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- {os: windows-latest, r: 'release'}
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- {os: ubuntu-latest, r: 'devel', http-user-agent: 'release'}
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- {os: ubuntu-latest, r: 'release'}
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- {os: ubuntu-latest, r: 'oldrel-1'}
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env:
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GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
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R_KEEP_PKG_SOURCE: yes
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steps:
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- uses: actions/checkout@v5
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- uses: r-lib/actions/setup-pandoc@v2
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- uses: r-lib/actions/setup-r@v2
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with:
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r-version: ${{ matrix.config.r }}
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http-user-agent: ${{ matrix.config.http-user-agent }}
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use-public-rspm: true
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- uses: r-lib/actions/setup-r-dependencies@v2
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with:
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extra-packages: any::rcmdcheck
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needs: check
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- uses: r-lib/actions/check-r-package@v2
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with:
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upload-snapshots: true
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build_args: 'c("--no-manual","--compact-vignettes=gs+qpdf")'

‎.github/workflows/docker-image.yml‎

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# build, push and cache the docker image. I have to adjust the following in case of a different repository:
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# - I have to add the 'BUILD_DATE' arg in the Dockerfile
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# - I have to create a DOCKER_PASSWORD (use the docker token) in the 'Settings' tab of the repository
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# - This github action also updates the dockerhub readme file
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# References:
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# - https://github.com/mlampros/IceSat2R/blob/master/.github/workflows/docker_image.yml
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# - https://github.com/orgs/community/discussions/25768#discussioncomment-3249184
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runs-on: ubuntu-latest
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steps:
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- name: Check Out Repo
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uses: actions/checkout@v5
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- id: string
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uses: ASzc/change-string-case-action@v1
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uses: ASzc/change-string-case-action@v6
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with:
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string: ${{ github.event.repository.name }}
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- name: Check Out Repo
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uses: actions/checkout@v2
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- name: Login to Docker Hub
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uses: docker/login-action@v2
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uses: docker/login-action@v3
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with:
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username: ${{ github.repository_owner }}
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password: ${{ secrets.DOCKER_PASSWORD }}
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- name: Set up Docker Buildx
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uses: docker/setup-buildx-action@v1
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id: buildx
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uses: docker/setup-buildx-action@v3
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- name: Build and push
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uses: docker/build-push-action@v2
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uses: docker/build-push-action@v6
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with:
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context: ./
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build-args: BUILD_DATE="$(date -u +'%Y-%m-%dT%H:%M:%SZ')"
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tags: ${{ github.repository_owner }}/${{ steps.string.outputs.lowercase }}:rstudiodev
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cache-from: type=registry,ref=${{ github.repository_owner }}/${{ steps.string.outputs.lowercase }}:buildcache
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cache-to: type=registry,ref=${{ github.repository_owner }}/${{ steps.string.outputs.lowercase }}:buildcache,mode=max
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- name: Update Docker Hub Description
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uses: peter-evans/dockerhub-description@v4
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with:
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username: ${{ github.repository_owner }}
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password: ${{ secrets.DOCKER_PASSWORD }}
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repository: ${{ github.repository_owner }}/${{ steps.string.outputs.lowercase }}
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short-description: ${{ github.event.repository.description }}
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readme-filepath: ./README.md

‎.github/workflows/issue.yml‎

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build:
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steps:
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- uses: Renato66/auto-label@v2
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- uses: Renato66/auto-label@v3
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with:
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repo-token: ${{ secrets.GITHUB_TOKEN }}
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ignore-comments: true

‎.github/workflows/pkgdown.yaml‎

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# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples
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# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
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on:
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push:
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branches: [main, master]
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pull_request:
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release:
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types: [published]
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workflow_dispatch:
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name: pkgdown.yaml
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permissions: read-all
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jobs:
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pkgdown:
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runs-on: ubuntu-latest
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# Only restrict concurrency for non-PR jobs
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concurrency:
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group: pkgdown-${{ github.event_name != 'pull_request' || github.run_id }}
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env:
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GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
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permissions:
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contents: write
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steps:
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- uses: actions/checkout@v5
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- uses: r-lib/actions/setup-pandoc@v2
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- uses: r-lib/actions/setup-r@v2
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with:
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use-public-rspm: true
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- uses: r-lib/actions/setup-r-dependencies@v2
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with:
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extra-packages: any::pkgdown, local::.
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needs: website
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- name: Build site
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run: pkgdown::build_site_github_pages(new_process = FALSE, install = FALSE)
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shell: Rscript {0}
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- name: Deploy to GitHub pages 🚀
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if: github.event_name != 'pull_request'
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uses: JamesIves/[email protected]
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with:
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clean: false
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branch: gh-pages
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folder: docs

‎.github/workflows/stale-actions.yml‎

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stale:
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- uses: actions/stale@v3
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- uses: actions/stale@v10
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with:
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repo-token: ${{ secrets.GITHUB_TOKEN }}
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days-before-stale: 12

‎.github/workflows/tic.yml‎

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‎.gitignore‎

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docs/
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.Rbuildignore
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.Rhistory
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docs

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