diff --git a/.gitignore b/.gitignore index 70c83873..5051e302 100644 --- a/.gitignore +++ b/.gitignore @@ -96,3 +96,4 @@ src/scripts/.ipynb_checkpoints/ src/ontology/imports/lipidmaps_import.owl src/ontology/imports/swisslipids_import.owl src/ontology/debug.log +tools/ diff --git a/src/ontology/imports/merged_import.owl b/src/ontology/imports/merged_import.owl index 719f6456..cfa00732 100644 --- a/src/ontology/imports/merged_import.owl +++ b/src/ontology/imports/merged_import.owl @@ -7,14 +7,12 @@ Prefix(rdfs:=) Ontology( - -Annotation(owl:versionInfo "2025-10-06") + +Annotation(owl:versionInfo "2025-11-11") -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -35,7 +33,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -556,6 +553,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -1176,11 +1174,14 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -3623,7 +3624,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -3717,7 +3717,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -3797,7 +3796,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -4937,7 +4935,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -5260,7 +5257,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -5409,7 +5405,10 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -5419,6 +5418,8 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -5483,8 +5484,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -6334,6 +6333,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -6389,6 +6389,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -6568,7 +6569,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -6612,6 +6612,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -6621,6 +6622,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -6688,6 +6690,8 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -6714,7 +6718,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -6748,7 +6751,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -6784,12 +6786,14 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -6814,7 +6818,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -7108,7 +7111,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -7311,7 +7313,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -7343,18 +7344,14 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -7421,7 +7418,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -7438,6 +7434,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -7574,6 +7571,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -7606,7 +7604,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -7649,6 +7646,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -7694,8 +7692,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -7713,7 +7709,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -7948,8 +7943,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -8030,7 +8023,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -8185,6 +8177,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -8202,6 +8195,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -8411,7 +8405,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -8424,6 +8417,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -8512,14 +8506,13 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -8931,7 +8924,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -9231,9 +9223,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -9272,8 +9261,12 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -9330,8 +9323,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -9365,9 +9356,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -9450,8 +9438,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -9490,10 +9476,8 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -9801,7 +9785,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -9890,6 +9873,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -9936,7 +9920,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -10121,8 +10104,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -10195,6 +10176,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -10436,6 +10418,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -10750,6 +10733,8 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -10887,7 +10872,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -10897,10 +10881,8 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -10914,7 +10896,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -11021,6 +11002,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -11253,7 +11235,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -11278,6 +11259,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -11286,7 +11268,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -11317,8 +11298,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -11332,7 +11311,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -11473,7 +11451,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -11488,14 +11465,12 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -11953,10 +11928,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -11997,7 +11969,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -12103,12 +12074,13 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -12165,8 +12137,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -12231,10 +12201,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -12514,9 +12481,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -12683,7 +12647,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -12794,6 +12757,8 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -13309,7 +13274,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -13486,6 +13450,8 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -13508,6 +13474,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -13961,7 +13928,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -14240,8 +14206,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -14344,7 +14308,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -14492,9 +14455,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -14616,7 +14576,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -14896,18 +14855,15 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -14939,6 +14895,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -14949,9 +14906,14 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -15069,11 +15031,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -15109,6 +15067,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -15160,7 +15119,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -15245,15 +15203,15 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -15271,18 +15229,12 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -15292,9 +15244,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -15305,7 +15255,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -15314,7 +15263,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -15397,8 +15345,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -15420,9 +15366,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -15446,8 +15389,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -15504,7 +15445,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -15515,7 +15455,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -15539,7 +15478,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -15550,7 +15488,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -15565,7 +15502,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -15666,8 +15602,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -15705,6 +15639,9 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -15742,7 +15679,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -15761,7 +15697,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -15889,7 +15824,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -15954,7 +15888,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -15964,7 +15897,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -15979,6 +15911,9 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -16115,9 +16050,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -16127,7 +16059,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -16265,9 +16196,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -16322,8 +16250,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -16655,7 +16581,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -17047,15 +16972,15 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -17100,7 +17025,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -17120,8 +17044,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -17174,7 +17096,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -17351,6 +17272,15 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -17387,7 +17317,9 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -17437,8 +17369,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -17448,6 +17378,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -17751,6 +17682,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -17905,6 +17837,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -18400,6 +18333,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -18909,7 +18843,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -19475,6 +19408,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -20490,6 +20424,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -20729,6 +20664,8 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -21050,6 +20987,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -21116,6 +21054,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -21252,6 +21191,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -21457,6 +21397,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -21494,6 +21435,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -21803,6 +21745,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -22343,7 +22286,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -23106,6 +23048,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -23113,6 +23056,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -23847,7 +23791,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -24281,7 +24224,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -24294,7 +24236,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -24367,6 +24308,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -24562,6 +24504,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -25555,6 +25498,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -25702,6 +25646,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -50762,9 +50707,11 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -50793,6 +50740,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -54466,12 +54414,17 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -60598,7 +60551,7 @@ AnnotationAssertion(rdfs:label "caus SubObjectPropertyOf( ) SubObjectPropertyOf( ) -# Object Property: (disease disrupts) +# Object Property: (disease causes disruption of) AnnotationAssertion( "A relationship between a disease and a process where the disease process disrupts the execution of the process.") AnnotationAssertion(rdfs:label "disease causes disruption of") @@ -65566,6 +65519,13 @@ SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (transfer RNA) + +AnnotationAssertion( "A single-stranded RNA molecule containing about 70-90 nucleotides, folded by intrastrand base pairing into a characteristic secondary ('cloverleaf') structure that carries a specific amino acid and matches it to its corresponding codon on an mRNA during protein synthesis.") +AnnotationAssertion(rdfs:label "transfer RNA") +EquivalentClasses( ) +SubClassOf( ) + # Class: (triglyceride) AnnotationAssertion( "Any glyceride resulting from the condensation of all three hydroxy groups of glycerol (propane-1,2,3-triol) with fatty acids.") @@ -69963,6 +69923,15 @@ SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (starch) + +AnnotationAssertion( "The most important reserve polysaccharide found in plants. It is a glucan consisting of amylose and amylopectin.") +AnnotationAssertion(rdfs:label "starch") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (phenylalanine) AnnotationAssertion( "An aromatic amino acid that is alanine in which one of the methyl hydrogens is substituted by a phenyl group.") @@ -69974,6 +69943,12 @@ SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (amylopectin) + +AnnotationAssertion( "A polydisperse highly branched polysaccharide derivative composed of chains of D-glucopyranose residues in alpha(1->4) glycosidic linkage. The chains are joined together by alpha(1->6) glycosidic linkages. A small number of alpha(1->3) glycosidic linkages and some 6-phosphate ester groups also may occur. The branches in amylopectin typically contain 24 to 30 glucose residues.") +AnnotationAssertion(rdfs:label "amylopectin") +SubClassOf( ) + # Class: (chromium atom) AnnotationAssertion( "A chromium group element atom that has atomic number 24.") @@ -70020,6 +69995,15 @@ AnnotationAssertion(rdfs:label "N(1 SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (amylose) + +AnnotationAssertion( "A glucan composed of unbranched chains of D-glucopyranose residues in alpha(1->4) glycosidic linkage. The number of repeated glucose subunits (n) is usually in the range of 300 to 3000, but can be many thousands. One of the two components of starch (the other, 70-80%, being amylopectin). Cf. linear maltodextrin, in which the chain length is typically between 3 and 17 glucose units.") +AnnotationAssertion(rdfs:label "amylose") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (nickel atom) AnnotationAssertion( "Chemical element (nickel group element atom) with atomic number 28.") @@ -87792,12 +87776,6 @@ AnnotationAssertion(rdfs:label "NS SubClassOf( ) SubClassOf( ObjectIntersectionOf(ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) -# Class: (NS forest marker set of pvalb GABAergic cortical interneuron (Human neocortex).) - -AnnotationAssertion(rdfs:label "NS forest marker set of pvalb GABAergic cortical interneuron (Human neocortex).") -SubClassOf( ) -SubClassOf( ObjectIntersectionOf(ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) - # Class: (NS forest marker set of sncg GABAergic cortical interneuron (Human neocortex).) AnnotationAssertion(rdfs:label "NS forest marker set of sncg GABAergic cortical interneuron (Human neocortex).") @@ -88359,7 +88337,7 @@ SubClassOf( "interneuron") SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (motor neuron) @@ -88536,16 +88514,6 @@ AnnotationAssertion(rdfs:label "mese SubClassOf( ) SubClassOf( ) -# Class: (fibrocyte) - -AnnotationAssertion(rdfs:comment "Cultured human fibrocytes are MHCI-positive, MHCII-positive, CD1a-negative, CD3-negative, CD4-negative, CD8-negative, CD10-negative, CD11b-positive, CD13-positive, CD14-negative, CD16-negative, CD18-positive, CD19-negative, CD25-negative, CD29-positive, CD32-positive, CD33-negative, CD34-positive, CD38-negative, CD40-positive, CD44-negative, CD45RO-positive, CD49a-positive, CD49b-positive, CD49c-negative, CD49d-negative, CD49e-positive, CD49f-negative, CD56-negative, CD58-positive, CD61-positive, CD64-positive, CD70-negative, CD71-positive, CD80-positive, CD83-negative, CD86-positive, CD103-negative, CD105-positive, CD181-positive, CD182-negative, CD183-positive, CD184-positive, CD185-negative, CD186-negative, CD191-positive, CD192-negative, CD193-positive, CD194-positive, CD195-positive, CD196-negative, CD197-positive, CD199-positive, desmin-negative, F4/80-positive, Gr1-positive, LSP-1-positive, MHCI-positive, MHCII-positive, alpha-SMA-negative, TCRab-negative, TCRgd-negative, and vimentin-positive. Fibrocytes are also capable of secreting angiogenin, bFGF, CCL2, CCL3, CCL4, CCL8, CXCL1, type I collagen, type III collagen, CTGF, fibronectin, GM-CSF, IL-1a, IL-6, IL-8, IL-10, M-CSF, MMP-9, PDGF-A, TGF-alpha, TGF-beta1, TNF-alpha, and VEGF-A.") -AnnotationAssertion(rdfs:label "fibrocyte") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (adipocyte) AnnotationAssertion(rdfs:label "adipocyte") @@ -89152,11 +89120,6 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (structural cell) - -AnnotationAssertion(rdfs:label "structural cell") -SubClassOf( ) - # Class: (somatotropin secreting cell) AnnotationAssertion(rdfs:label "somatotropin secreting cell") @@ -89301,20 +89264,18 @@ SubClassOf( ObjectSomeValuesFrom( (scleral cell) AnnotationAssertion(rdfs:label "scleral cell") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (choroidal cell of the eye) AnnotationAssertion(rdfs:label "choroidal cell of the eye") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -89413,8 +89374,8 @@ SubClassOf( ObjectSomeValuesFrom( (tendon cell) AnnotationAssertion(rdfs:label "tendon cell") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (blood cell (sensu Nematoda and Protostomia)) @@ -90408,7 +90369,9 @@ SubClassOf( ObjectSomeValuesFrom( "Do all of these cells really develop from some mesenchymal stem cell?") AnnotationAssertion(rdfs:label "mesangial cell") SubClassOf( ) -SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pinealocyte) @@ -91123,7 +91086,7 @@ AnnotationAssertion(rdfs:label "matu EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -91219,7 +91182,9 @@ DisjointClasses( (mature natural killer cell) AnnotationAssertion(rdfs:label "mature natural killer cell") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pro-NK cell) @@ -92138,11 +92103,12 @@ SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (mucosal invariant T cell) +# Class: (mucosal-associated invariant T cell) -AnnotationAssertion(rdfs:label "mucosal invariant T cell") +AnnotationAssertion(rdfs:label "mucosal-associated invariant T cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -92161,8 +92127,9 @@ SubClassOf( ObjectSomeValuesFrom( (thymic plasmacytoid dendritic cell) AnnotationAssertion(rdfs:label "thymic plasmacytoid dendritic cell") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -92330,16 +92297,17 @@ SubClassOf( ObjectSomeValuesFrom( "These cells are also reportedly CD10-negative, CD39-positive, CD44-positive, CD71-negative, CD77-negative, IgM-positive, IgG-negative, IgA-negative, and IgE-negative.") AnnotationAssertion(rdfs:label "Bm1 B cell") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (Bm2 B cell) AnnotationAssertion(rdfs:comment "These cells are also CD10-negative, CD39-positive, CD44-positive, CD71-negative, CD77-negative, IgM-positive, IgG-negative, IgA-negative, and IgE-negative.") AnnotationAssertion(rdfs:label "Bm2 B cell") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -92359,7 +92327,7 @@ SubClassOf( ObjectSomeValuesFrom( "Bm2' B cells are also reportedly CD10-positive, CD39-negative, CD44-negative, CD71-positive, CD77-negative, IgM-positive, IgG-negative, IgA-negative, and IgE-negative.") AnnotationAssertion(rdfs:label "Bm2' B cell") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -92371,7 +92339,7 @@ SubClassOf( ObjectSomeValuesFrom( "Bm3 B cells are also reportedly CD10-positive, CD23-negative, CD39-negative, CD44-negative, CD71-positive, and CD77-positive.") AnnotationAssertion(rdfs:label "Bm3 B cell") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -92383,7 +92351,7 @@ SubClassOf( ObjectSomeValuesFrom( "Bm4 B cells are also reportedly CD10-positive, CD23-negative, CD39-negative, CD44-positive, and CD71-positive.") AnnotationAssertion(rdfs:label "Bm4 B cell") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -92395,7 +92363,7 @@ SubClassOf( ObjectSomeValuesFrom( "Bm5 B cells are also reportedly CD10-positive, CD23-negative, CD38-negative, CD39-positive, CD44-positive, CD71-positive, and CD77-negative.") AnnotationAssertion(rdfs:label "Bm5 B cell") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -92584,6 +92552,7 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (conventional dendritic cell) @@ -92604,6 +92573,7 @@ SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (immature CD11c-low plasmacytoid dendritic cell) @@ -93849,7 +93819,7 @@ SubClassOf( ObjectSomeValuesFrom( (T follicular helper cell) AnnotationAssertion(rdfs:label "T follicular helper cell") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -93857,34 +93827,33 @@ SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -# Class: (immature NK T cell stage I) +# Class: (immature NK T cell stage I, mouse) -AnnotationAssertion(rdfs:label "immature NK T cell stage I") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +AnnotationAssertion(rdfs:label "immature NK T cell stage I, mouse") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (immature NK T cell stage II) +# Class: (immature NK T cell stage II, mouse) -AnnotationAssertion(rdfs:comment "NKT.44-NK1.1-.Th was assigned as an exact synonym based on sorting strategy displayed at immgene.org.") -AnnotationAssertion(rdfs:label "immature NK T cell stage II") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +AnnotationAssertion(rdfs:label "immature NK T cell stage II, mouse") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (immature NK T cell stage III) +# Class: (immature NK T cell stage III, mouse) -AnnotationAssertion(rdfs:label "immature NK T cell stage III") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +AnnotationAssertion(rdfs:label "immature NK T cell stage III, mouse") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -93892,10 +93861,10 @@ SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (immature NK T cell stage IV) +# Class: (immature NK T cell stage IV, mouse) -AnnotationAssertion(rdfs:label "immature NK T cell stage IV") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +AnnotationAssertion(rdfs:label "immature NK T cell stage IV, mouse") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -93930,7 +93899,7 @@ SubClassOf( ObjectSomeValuesFrom( "Markers associated with mouse cells.") AnnotationAssertion(rdfs:label "fraction A pre-pro B cell") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -93938,6 +93907,7 @@ SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (early pro-B cell) @@ -93995,7 +93965,7 @@ SubClassOf( ObjectSomeValuesFrom( (fraction C' precursor B cell) AnnotationAssertion(rdfs:label "fraction C' precursor B cell") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -94019,7 +93989,7 @@ SubClassOf( ObjectSomeValuesFrom( "Fraction D precursor B cells are also reportedly CD24-positive and sIgD-negative.") AnnotationAssertion(rdfs:label "fraction D precursor B cell") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -94043,7 +94013,7 @@ SubClassOf( ObjectSomeValuesFrom( "Markers associated with mouse cells. These cells are also reportedly sIgD-negative.") AnnotationAssertion(rdfs:label "fraction E immature B cell") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -94067,7 +94037,7 @@ SubClassOf( ObjectSomeValuesFrom( (fraction F mature B cell) AnnotationAssertion(rdfs:label "fraction F mature B cell") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -94529,11 +94499,12 @@ SubClassOf( ObjectSomeValuesFrom( (CD25-positive, CD27-positive immature gamma-delta T cell) AnnotationAssertion(rdfs:label "CD25-positive, CD27-positive immature gamma-delta T cell") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -94716,7 +94687,6 @@ AnnotationAssertion(rdfs:label "extr EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (follicular cell of ovary) @@ -95597,8 +95567,8 @@ SubClassOf( ObjectSomeValuesFrom( (trabecular meshwork cell) AnnotationAssertion(rdfs:label "trabecular meshwork cell") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (respiratory tract epithelial cell) @@ -95661,12 +95631,13 @@ SubClassOf( ObjectSomeValuesFrom( "Markers are associated with mice. The Gr epitope is used to describe this cell type is found on both Ly6c and Ly6g. However, its the Ly6c that is considered the specific marker, and thus used in the cross-product.") AnnotationAssertion(rdfs:label "Gr1-high classical monocyte") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (CD14-positive, CD16-positive monocyte) @@ -95681,7 +95652,7 @@ SubClassOf( ObjectSomeValuesFrom( (Gr1-positive, CD43-positive monocyte) AnnotationAssertion(rdfs:label "Gr1-positive, CD43-positive monocyte") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -95700,11 +95671,12 @@ SubClassOf( ObjectSomeValuesFrom( (fraction B/C precursor B cell) AnnotationAssertion(rdfs:label "fraction B/C precursor B cell") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (mature dendritic epithelial T cell precursor) @@ -95754,6 +95726,7 @@ SubClassOf( ObjectSomeValuesFrom( "mature T cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -95763,6 +95736,7 @@ AnnotationAssertion(rdfs:label "imma EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (nucleated reticulocyte) @@ -96792,6 +96766,7 @@ SubClassOf( "hippocampal neuron") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -96878,9 +96853,13 @@ SubClassOf( ObjectSomeValuesFrom( (acinar cell of salivary gland) AnnotationAssertion(rdfs:label "acinar cell of salivary gland") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (paneth cell of the appendix) @@ -96991,8 +96970,9 @@ SubClassOf( (otic fibrocyte) AnnotationAssertion(rdfs:label "otic fibrocyte") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (type 2 otic fibrocyte) @@ -97158,7 +97138,6 @@ SubClassOf( ObjectSomeValuesFrom( "somatomotor neuron"@en) EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -97288,7 +97267,6 @@ SubClassOf( "A non-polarised cell precursor cell that is part of some mesenchyme, is associated with the cell matrix but is not connected to other cells and is capable of migration.") AnnotationAssertion(rdfs:label "mesenchymal cell") SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -97360,7 +97338,9 @@ SubClassOf( ObjectSomeValuesFrom( (lower motor neuron) AnnotationAssertion(rdfs:label "lower motor neuron"@en) +SubClassOf( ) SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesothelial cell of intestine) @@ -98050,7 +98030,6 @@ SubClassOf( "cerebral cortex neuron") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -98663,13 +98642,6 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (fibrocyte of adventitia of ureter) - -AnnotationAssertion(rdfs:label "fibrocyte of adventitia of ureter") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) - # Class: (epicardial adipocyte) AnnotationAssertion(rdfs:label "epicardial adipocyte") @@ -100070,7 +100042,6 @@ AnnotationAssertion(rdfs:label "olfa EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -100104,7 +100075,7 @@ SubClassOf( ObjectSomeValuesFrom( "medium spiny neuron") SubClassOf( ) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mitral cell) @@ -100116,7 +100087,7 @@ SubClassOf( ObjectSomeValuesFrom( (olfactory bulb tufted cell) AnnotationAssertion(rdfs:label "olfactory bulb tufted cell") -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (parvocellular neurosecretory cell) @@ -100869,8 +100840,8 @@ SubClassOf( ObjectSomeValuesFrom( "http://www.sciencellonline.com/site/productInformation.php?keyword=6620") AnnotationAssertion(rdfs:label "optic choroid fibroblast") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ) +SubClassOf( ) # Class: (mammary microvascular endothelial cell) @@ -101086,38 +101057,30 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (sncg GABAergic cortical interneuron) +# Class: (sncg GABAergic interneuron) -AnnotationAssertion(rdfs:label "sncg GABAergic cortical interneuron") +AnnotationAssertion(rdfs:label "sncg GABAergic interneuron") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (VIP GABAergic cortical interneuron) +# Class: (VIP GABAergic interneuron) -AnnotationAssertion(rdfs:label "VIP GABAergic cortical interneuron") +AnnotationAssertion(rdfs:label "VIP GABAergic interneuron") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (sst GABAergic cortical interneuron) +# Class: (sst GABAergic interneuron) -AnnotationAssertion(rdfs:label "sst GABAergic cortical interneuron") +AnnotationAssertion(rdfs:label "sst GABAergic interneuron") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (pvalb GABAergic cortical interneuron) - -AnnotationAssertion(rdfs:label "pvalb GABAergic cortical interneuron") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (lateral ganglionic eminence derived neuron) AnnotationAssertion(rdfs:label "lateral ganglionic eminence derived neuron"@en) @@ -101164,9 +101127,9 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (caudal ganglionic eminence derived cortical interneuron) +# Class: (caudal ganglionic eminence derived interneuron) -AnnotationAssertion(rdfs:label "caudal ganglionic eminence derived cortical interneuron") +AnnotationAssertion(rdfs:label "caudal ganglionic eminence derived interneuron") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -101179,9 +101142,9 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (medial ganglionic eminence derived GABAergic cortical interneuron) +# Class: (medial ganglionic eminence derived GABAergic interneuron) -AnnotationAssertion(rdfs:label "medial ganglionic eminence derived GABAergic cortical interneuron") +AnnotationAssertion(rdfs:label "medial ganglionic eminence derived GABAergic interneuron") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -101450,6 +101413,7 @@ SubClassOf( ObjectSomeValuesFrom( "reelin GABAergic cortical interneuron") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -101554,6 +101518,7 @@ SubClassOf( ObjectSomeValuesFrom( "suprabasal keratinocyte") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (retinal astrocyte) @@ -101839,7 +101804,6 @@ SubClassOf( ObjectSomeValuesFrom( (Schlemm's canal endothelial cell) -AnnotationAssertion( "A specialised endothelial cell that is part of the canal of Schlemm. This cell type shares characteristics and expresses markers of both blood and lymphatic endothelial cells (Kizhatil et al., 2014) and regulates aqueous humor outflow resistance by modulating pore formation and responding to mechanical strain (Stamer et al., 2016).") AnnotationAssertion(rdfs:label "Schlemm's canal endothelial cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) @@ -102262,6 +102226,25 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (serous acinar cell of salivary gland) + +AnnotationAssertion(rdfs:label "serous acinar cell of salivary gland") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (mucous acinar cell of salivary gland) + +AnnotationAssertion(rdfs:label "mucous acinar cell of salivary gland") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (Purkinje layer interneuron) AnnotationAssertion(rdfs:label "Purkinje layer interneuron") @@ -102269,6 +102252,11 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (suprabasal cell) + +AnnotationAssertion(rdfs:label "suprabasal cell") +SubClassOf( ) + # Class: (mitochondrion inheritance) AnnotationAssertion(rdfs:label "mitochondrion inheritance") @@ -102339,6 +102327,20 @@ SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (peptidyltransferase activity) + +AnnotationAssertion(rdfs:label "peptidyltransferase activity") +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) + +# Class: (tRNA binding) + +AnnotationAssertion(rdfs:label "tRNA binding") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (urea cycle) AnnotationAssertion(rdfs:label "urea cycle") @@ -102367,7 +102369,6 @@ SubClassOf( ObjectSomeValuesFrom( "L-ornithine transmembrane transporter activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -102402,7 +102403,6 @@ SubClassOf( "S-adenosyl-L-methionine transmembrane transporter activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -102498,7 +102498,8 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) SubClassOf( ) -SubClassOf( ) +SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) @@ -102647,15 +102648,15 @@ SubClassOf( ObjectSomeValuesFrom( "sulfite transmembrane transport") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sulfite transmembrane transporter activity) AnnotationAssertion(rdfs:label "sulfite transmembrane transporter activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -102847,22 +102848,6 @@ AnnotationAssertion(rdfs:label "sist SubClassOf( ) SubClassOf( ) -# Class: (regulation of glutamine family amino acid metabolic process) - -AnnotationAssertion(rdfs:label "regulation of glutamine family amino acid metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (regulation of arginine metabolic process) - -AnnotationAssertion(rdfs:label "regulation of arginine metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (cell morphogenesis) AnnotationAssertion(rdfs:label "cell morphogenesis") @@ -110206,6 +110191,15 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (endocardial cushion fusion) + +AnnotationAssertion(rdfs:label "endocardial cushion fusion") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (apoptotic process involved in outflow tract morphogenesis) AnnotationAssertion(rdfs:label "apoptotic process involved in outflow tract morphogenesis") @@ -110693,6 +110687,15 @@ SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (cell-cell adhesion involved in ameboidal cell migration) + +AnnotationAssertion(rdfs:label "cell-cell adhesion involved in ameboidal cell migration") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (establishment or maintenance of cytoskeleton polarity involved in ameboidal cell migration) AnnotationAssertion(rdfs:label "establishment or maintenance of cytoskeleton polarity involved in ameboidal cell migration") @@ -112096,7 +112099,6 @@ SubClassOf( ObjectSomeValuesFrom( "acetylcholine transmembrane transporter activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -112105,7 +112107,6 @@ SubClassOf( ObjectSomeValuesFrom( "L-histidine transmembrane transporter activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) @@ -112123,7 +112124,6 @@ SubClassOf( "L-tyrosine transmembrane transporter activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -112159,7 +112159,6 @@ SubClassOf( ObjectSomeValuesFrom( "phosphate transmembrane transporter activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -112206,14 +112205,6 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (organic acid transmembrane transporter activity) - -AnnotationAssertion(rdfs:label "organic acid transmembrane transporter activity") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (purine nucleobase transmembrane transporter activity) AnnotationAssertion(rdfs:label "purine nucleobase transmembrane transporter activity") @@ -112236,7 +112227,6 @@ AnnotationAssertion(rdfs:label "ATP EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -112269,8 +112259,6 @@ SubClassOf( ObjectSomeValuesFrom( "taurine transmembrane transporter activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) SubClassOf( ) SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) @@ -112288,7 +112276,7 @@ SubClassOf( ObjectSomeValuesFrom( "water transmembrane transporter activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -112305,7 +112293,6 @@ SubClassOf( ObjectSomeValuesFrom( "UDP-N-acetylglucosamine transmembrane transporter activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -112529,7 +112516,7 @@ SubClassOf( ObjectSomeValuesFrom( "collagen type IV trimer") SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (basement membrane) @@ -112538,6 +112525,11 @@ AnnotationAssertion(rdfs:comment "No AnnotationAssertion(rdfs:label "basement membrane") SubClassOf( ) +# Class: (interstitial matrix) + +AnnotationAssertion(rdfs:label "interstitial matrix") +SubClassOf( ) + # Class: (extracellular space) AnnotationAssertion(rdfs:comment "Note that for multicellular organisms, the extracellular space refers to everything outside a cell, but still within the organism (excluding the extracellular matrix). Gene products from a multi-cellular organism that are secreted from a cell into the interstitial fluid or blood can therefore be annotated to this term.") @@ -112609,6 +112601,14 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (chromatin silencing complex) + +AnnotationAssertion(rdfs:label "chromatin silencing complex") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (chromosome) AnnotationAssertion(rdfs:comment "Chromosomes include parts that are not part of the chromatin. Examples include the kinetochore.") @@ -113143,6 +113143,21 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (starch metabolic process) + +AnnotationAssertion(rdfs:label "starch metabolic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (starch catabolic process) + +AnnotationAssertion(rdfs:label "starch catabolic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (disaccharide metabolic process) AnnotationAssertion(rdfs:label "disaccharide metabolic process") @@ -113307,7 +113322,7 @@ SubClassOf( ObjectSomeValuesFrom( "N-acetylglucosamine metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (N-acetylglucosamine biosynthetic process) @@ -113343,15 +113358,6 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (UDP-N-acetylglucosamine catabolic process) - -AnnotationAssertion(rdfs:label "UDP-N-acetylglucosamine catabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (alcohol metabolic process) AnnotationAssertion(rdfs:label "alcohol metabolic process") @@ -113563,6 +113569,7 @@ SubClassOf( (fermentation) +AnnotationAssertion(rdfs:comment "PMID:38821505 mentions exceptions regarding organic compounds and ETC. Fermentation sub-processes exclude glycolysis to prevent redundancy with the glycolytic pathway.") AnnotationAssertion(rdfs:label "fermentation") SubClassOf( ) @@ -113600,7 +113607,7 @@ SubClassOf( ObjectSomeValuesFrom( "regulation of nucleotide metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -113612,14 +113619,6 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (regulation of pyrimidine nucleobase metabolic process) - -AnnotationAssertion(rdfs:label "regulation of pyrimidine nucleobase metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (purine nucleobase metabolic process) AnnotationAssertion(rdfs:label "purine nucleobase metabolic process") @@ -113903,6 +113902,13 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (tRNA metabolic process) + +AnnotationAssertion(rdfs:label "tRNA metabolic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (RNA catabolic process) AnnotationAssertion(rdfs:label "RNA catabolic process") @@ -113950,20 +113956,29 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (tRNA export from nucleus) + +AnnotationAssertion(rdfs:label "tRNA export from nucleus") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (translation) AnnotationAssertion(rdfs:label "translation") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (translational initiation) @@ -114044,11 +114059,12 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (protein glycosylation) +# Class: (obsolete protein glycosylation) -AnnotationAssertion(rdfs:label "protein glycosylation") -SubClassOf( ) -SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:comment "The reason for obsoletion is that this term represents a molecular function.") +AnnotationAssertion(rdfs:label "obsolete protein glycosylation") +AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (protein N-linked glycosylation) @@ -114130,23 +114146,16 @@ SubClassOf( ObjectSomeValuesFrom( "asparagine metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (asparagine biosynthetic process) - -AnnotationAssertion(rdfs:label "asparagine biosynthetic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (L-asparagine catabolic process) AnnotationAssertion(rdfs:label "L-asparagine catabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) +SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cysteine metabolic process) @@ -114187,8 +114196,9 @@ SubClassOf( ObjectSomeValuesFrom( "L-glutamate catabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ) +SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gamma-aminobutyrate shunt) @@ -114222,15 +114232,16 @@ SubClassOf( ObjectSomeValuesFrom( "L-glutamine catabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) +SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (glycine metabolic process) AnnotationAssertion(rdfs:label "glycine metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (glycine biosynthetic process) @@ -114247,8 +114258,8 @@ SubClassOf( ObjectSomeValuesFrom( "glycine catabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (L-histidine metabolic process) @@ -114294,8 +114305,9 @@ SubClassOf( ObjectSomeValuesFrom( "L-leucine catabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ) +SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lysine metabolic process) @@ -114318,7 +114330,7 @@ SubClassOf( ObjectSomeValuesFrom( "methionine metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (S-adenosylmethionine biosynthetic process) @@ -114344,7 +114356,8 @@ AnnotationAssertion(rdfs:label "L-ph EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) +SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (proline metabolic process) @@ -114359,14 +114372,14 @@ SubClassOf( ObjectSomeValuesFrom( "L-proline catabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) +SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (L-serine metabolic process) AnnotationAssertion(rdfs:label "L-serine metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -114386,7 +114399,6 @@ SubClassOf( ObjectSomeValuesFrom( "L-serine catabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -114395,7 +114407,7 @@ SubClassOf( ObjectSomeValuesFrom( "threonine metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (L-tryptophan metabolic process) @@ -114415,7 +114427,8 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) SubClassOf( ) -SubClassOf( ) +SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tyrosine metabolic process) @@ -114427,13 +114440,14 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (tyrosine biosynthetic process) +# Class: (L-tyrosine biosynthetic process) -AnnotationAssertion(rdfs:label "tyrosine biosynthetic process") +AnnotationAssertion(rdfs:label "L-tyrosine biosynthetic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) +SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (L-tyrosine catabolic process) @@ -114442,7 +114456,8 @@ AnnotationAssertion(rdfs:label "L-ty EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) +SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (valine metabolic process) @@ -114706,7 +114721,7 @@ SubClassOf( ObjectSomeValuesFrom( "acyl-CoA metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -114853,7 +114868,8 @@ SubClassOf( ObjectSomeValuesFrom( "glucosylceramide biosynthetic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) +SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (glucosylceramide catabolic process) @@ -114877,8 +114893,9 @@ SubClassOf( ObjectSomeValuesFrom( "galactosylceramide biosynthetic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (galactosylceramide catabolic process) @@ -116483,7 +116500,6 @@ SubClassOf( "negative regulation of epidermal growth factor-activated receptor activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) @@ -116492,17 +116508,6 @@ SubClassOf( ObjectComplementOf(Object SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (regulation of epidermal growth factor-activated receptor activity) - -AnnotationAssertion(rdfs:label "regulation of epidermal growth factor-activated receptor activity") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) -SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) -SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (cell surface receptor protein serine/threonine kinase signaling pathway) AnnotationAssertion(rdfs:label "cell surface receptor protein serine/threonine kinase signaling pathway") @@ -116998,7 +117003,7 @@ SubClassOf( ObjectSomeValuesFrom( "sensory organ development") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (open tracheal system development) @@ -117869,7 +117874,7 @@ SubClassOf( ObjectSomeValuesFrom( "acetylcholine metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (acetylcholine biosynthetic process) @@ -117877,7 +117882,7 @@ SubClassOf( ObjectSomeValuesFrom( "acetylcholine biosynthetic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (spermidine biosynthetic process) @@ -118125,14 +118130,6 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (organic anion transmembrane transporter activity) - -AnnotationAssertion(rdfs:label "organic anion transmembrane transporter activity") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (folic acid transmembrane transporter activity) AnnotationAssertion(rdfs:label "folic acid transmembrane transporter activity") @@ -118149,7 +118146,6 @@ SubClassOf( ObjectSomeValuesFrom( "ammonium channel activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -118157,7 +118153,6 @@ SubClassOf( ObjectSomeValuesFrom( "acetyl-CoA transmembrane transporter activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) @@ -118379,64 +118374,33 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (glutamine family amino acid catabolic process) - -AnnotationAssertion(rdfs:label "glutamine family amino acid catabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (aspartate family amino acid metabolic process) +# Class: (obsolete aspartate family amino acid metabolic process) -AnnotationAssertion(rdfs:label "aspartate family amino acid metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion(rdfs:comment "The reason for obsoletion is that this is an unnecessary grouping term.") +AnnotationAssertion(rdfs:label "obsolete aspartate family amino acid metabolic process") +AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (aspartate family amino acid biosynthetic process) AnnotationAssertion(rdfs:label "aspartate family amino acid biosynthetic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (aspartate family amino acid catabolic process) +# Class: (obsolete serine family amino acid metabolic process) -AnnotationAssertion(rdfs:label "aspartate family amino acid catabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (serine family amino acid metabolic process) - -AnnotationAssertion(rdfs:label "serine family amino acid metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion(rdfs:comment "The reason for obsoletion is that this is an unnecessary grouping term.") +AnnotationAssertion(rdfs:label "obsolete serine family amino acid metabolic process") +AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (serine family amino acid biosynthetic process) AnnotationAssertion(rdfs:label "serine family amino acid biosynthetic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (serine family amino acid catabolic process) - -AnnotationAssertion(rdfs:label "serine family amino acid catabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (aromatic amino acid metabolic process) AnnotationAssertion(rdfs:label "aromatic amino acid metabolic process") @@ -118469,14 +118433,6 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (pyruvate family amino acid catabolic process) - -AnnotationAssertion(rdfs:label "pyruvate family amino acid catabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (branched-chain amino acid metabolic process) AnnotationAssertion(rdfs:label "branched-chain amino acid metabolic process") @@ -118535,7 +118491,8 @@ AnnotationAssertion(rdfs:label "L-me EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) +SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (threonine biosynthetic process) @@ -118562,7 +118519,8 @@ AnnotationAssertion(rdfs:label "L-ph EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) +SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) @@ -118651,7 +118609,7 @@ SubClassOf( ObjectSomeValuesFrom( "nucleoside metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nucleotide metabolic process) @@ -119015,16 +118973,6 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (nucleotide-sugar catabolic process) - -AnnotationAssertion(rdfs:label "nucleotide-sugar catabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (cobalamin metabolic process) AnnotationAssertion(rdfs:label "cobalamin metabolic process") @@ -119153,6 +119101,14 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (tRNA transcription) + +AnnotationAssertion(rdfs:label "tRNA transcription") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (protein secretion) AnnotationAssertion(rdfs:label "protein secretion") @@ -119253,7 +119209,6 @@ SubClassOf( ObjectSomeValuesFrom( "nitrogen fixation") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -119659,7 +119614,6 @@ SubClassOf( ObjectSomeValuesFrom( "tropane alkaloid biosynthetic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (catechol-containing compound metabolic process) @@ -120264,6 +120218,15 @@ SubClassOf( ObjectComplementOf(Object SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (amylopectin biosynthetic process) + +AnnotationAssertion(rdfs:label "amylopectin biosynthetic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (meiotic chromosome condensation) AnnotationAssertion(rdfs:label "meiotic chromosome condensation") @@ -120514,19 +120477,10 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) -# Class: (regulation of anion channel activity) - -AnnotationAssertion(rdfs:label "regulation of anion channel activity") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (negative regulation of anion channel activity) AnnotationAssertion(rdfs:label "negative regulation of anion channel activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -120872,6 +120826,14 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (regulation of starch biosynthetic process) + +AnnotationAssertion(rdfs:label "regulation of starch biosynthetic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (glutamine secretion) AnnotationAssertion(rdfs:label "glutamine secretion") @@ -121259,26 +121221,10 @@ SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (regulation of alkaline phosphatase activity) - -AnnotationAssertion(rdfs:label "regulation of alkaline phosphatase activity") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (negative regulation of alkaline phosphatase activity) - -AnnotationAssertion(rdfs:label "negative regulation of alkaline phosphatase activity") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (positive regulation of alkaline phosphatase activity) AnnotationAssertion(rdfs:label "positive regulation of alkaline phosphatase activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -121415,14 +121361,6 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (positive regulation of hydrogen peroxide metabolic process) - -AnnotationAssertion(rdfs:label "positive regulation of hydrogen peroxide metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (negative regulation of hydrogen peroxide metabolic process) AnnotationAssertion(rdfs:label "negative regulation of hydrogen peroxide metabolic process") @@ -121443,7 +121381,6 @@ SubClassOf( ObjectSomeValuesFrom( "positive regulation of hydrogen peroxide biosynthetic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -121898,7 +121835,7 @@ AnnotationAssertion(rdfs:label "nega EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (regulation of glucose metabolic process) @@ -123402,7 +123339,6 @@ SubClassOf( ObjectSomeValuesFrom( "proton transmembrane transporter activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -123430,27 +123366,11 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (organic cation transmembrane transporter activity) - -AnnotationAssertion(rdfs:label "organic cation transmembrane transporter activity") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (inorganic anion transmembrane transporter activity) - -AnnotationAssertion(rdfs:label "inorganic anion transmembrane transporter activity") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (bicarbonate transmembrane transporter activity) AnnotationAssertion(rdfs:label "bicarbonate transmembrane transporter activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -123459,7 +123379,6 @@ SubClassOf( ObjectSomeValuesFrom( "chloride transmembrane transporter activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -123468,7 +123387,6 @@ SubClassOf( ObjectSomeValuesFrom( "iodide transmembrane transporter activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -123476,7 +123394,7 @@ SubClassOf( ObjectSomeValuesFrom( "nitrite transmembrane transporter activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -123484,7 +123402,6 @@ SubClassOf( ObjectSomeValuesFrom( "sulfate transmembrane transporter activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -123643,7 +123560,6 @@ SubClassOf( ObjectSomeValuesFrom( "glucose-6-phosphate transmembrane transporter activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -123753,7 +123669,6 @@ SubClassOf( ObjectSomeValuesFrom( "L-asparagine transmembrane transporter activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) @@ -123773,7 +123688,6 @@ SubClassOf( ObjectSomeValuesFrom( "L-glutamine transmembrane transporter activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -123783,7 +123697,6 @@ SubClassOf( ObjectSomeValuesFrom( "glycine transmembrane transporter activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -123793,7 +123706,6 @@ SubClassOf( ObjectSomeValuesFrom( "L-lysine transmembrane transporter activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -123803,7 +123715,6 @@ SubClassOf( ObjectSomeValuesFrom( "L-leucine transmembrane transporter activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) @@ -123821,7 +123732,6 @@ SubClassOf( ObjectSomeValuesFrom( "L-phenylalanine transmembrane transporter activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -123831,7 +123741,6 @@ SubClassOf( ObjectSomeValuesFrom( "L-proline transmembrane transporter activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -123841,7 +123750,6 @@ SubClassOf( ObjectSomeValuesFrom( "L-serine transmembrane transporter activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -123850,7 +123758,6 @@ SubClassOf( ObjectSomeValuesFrom( "L-tryptophan transmembrane transporter activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -123951,7 +123858,6 @@ AnnotationAssertion(rdfs:label "ADP EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -123967,7 +123873,7 @@ SubClassOf( ObjectSomeValuesFrom( "choline transmembrane transporter activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -124000,7 +123906,6 @@ SubClassOf( ObjectSomeValuesFrom( "coenzyme A transmembrane transporter activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) @@ -124030,7 +123935,6 @@ SubClassOf( ObjectSomeValuesFrom( "thiamine transmembrane transporter activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) @@ -124115,13 +124019,6 @@ SubClassOf( "secondary active transmembrane transporter activity") SubClassOf( ) -# Class: (inorganic molecular entity transmembrane transporter activity) - -AnnotationAssertion(rdfs:label "inorganic molecular entity transmembrane transporter activity") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (methotrexate transmembrane transporter activity) AnnotationAssertion(rdfs:label "methotrexate transmembrane transporter activity") @@ -124243,7 +124140,6 @@ SubClassOf( ObjectSomeValuesFrom( "spermidine transmembrane transporter activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -124278,7 +124174,7 @@ SubClassOf( ObjectSomeValuesFrom( "quaternary ammonium group transmembrane transporter activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -125281,7 +125177,7 @@ SubClassOf( ObjectSomeValuesFrom( "methane metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (methanogenesis) @@ -125322,6 +125218,13 @@ AnnotationAssertion(rdfs:label "memb SubClassOf( ) DisjointClasses( ) +# Class: (tRNA import into mitochondrion) + +AnnotationAssertion(rdfs:label "tRNA import into mitochondrion") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) + # Class: (viral process) AnnotationAssertion(rdfs:comment "See also the biological process terms 'viral infectious cycle ; GO:0019058' and 'lysogeny ; GO:0030069'.") @@ -125448,6 +125351,14 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (tRNA decay) + +AnnotationAssertion(rdfs:label "tRNA decay") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (synaptic vesicle exocytosis) AnnotationAssertion(rdfs:label "synaptic vesicle exocytosis") @@ -125659,7 +125570,7 @@ SubClassOf( ObjectSomeValuesFrom( "glycoside metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (glycoside biosynthetic process) @@ -126749,7 +126660,7 @@ SubClassOf( ObjectSomeValuesFrom( "toluene metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -126908,13 +126819,6 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (regulation of phosphate metabolic process) - -AnnotationAssertion(rdfs:label "regulation of phosphate metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (cytokine-mediated signaling pathway) AnnotationAssertion(rdfs:label "cytokine-mediated signaling pathway") @@ -127009,6 +126913,14 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (starch biosynthetic process) + +AnnotationAssertion(rdfs:label "starch biosynthetic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (glycine biosynthetic process from serine) AnnotationAssertion(rdfs:label "glycine biosynthetic process from serine") @@ -127017,26 +126929,27 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (asparagine biosynthetic process from oxaloacetate) +# Class: (L-asparagine biosynthetic process from oxaloacetate) -AnnotationAssertion(rdfs:label "asparagine biosynthetic process from oxaloacetate") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +AnnotationAssertion(rdfs:label "L-asparagine biosynthetic process from oxaloacetate") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) +SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (asparagine biosynthetic process from cysteine) +# Class: (L-asparagine biosynthetic process from cysteine) -AnnotationAssertion(rdfs:label "asparagine biosynthetic process from cysteine") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) -SubClassOf( ) +AnnotationAssertion(rdfs:label "L-asparagine biosynthetic process from cysteine") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (tyrosine biosynthetic process, by oxidation of phenylalanine) +# Class: (L-tyrosine biosynthetic process, by oxidation of phenylalanine) -AnnotationAssertion(rdfs:label "tyrosine biosynthetic process, by oxidation of phenylalanine") +AnnotationAssertion(rdfs:label "L-tyrosine biosynthetic process, by oxidation of phenylalanine") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -127151,7 +127064,6 @@ SubClassOf( ObjectSomeValuesFrom( "nicotinate nucleotide biosynthetic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nicotinamide nucleotide biosynthetic process) @@ -127361,7 +127273,6 @@ SubClassOf( ObjectSomeValuesFrom( "L-cysteine catabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) @@ -127399,7 +127310,6 @@ SubClassOf( ObjectSomeValuesFrom( "glycine decarboxylation via glycine cleavage system") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (L-ornithine catabolic process via proline) @@ -127466,7 +127376,8 @@ SubClassOf( ObjectSomeValuesFrom( "L-lysine catabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) +SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (D-amino acid catabolic process) @@ -127738,14 +127649,6 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (acetate fermentation) - -AnnotationAssertion(rdfs:label "acetate fermentation") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (glucose catabolic process to D-lactate and ethanol) AnnotationAssertion(rdfs:label "glucose catabolic process to D-lactate and ethanol") @@ -127774,14 +127677,6 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (glycolytic fermentation) - -AnnotationAssertion(rdfs:label "glycolytic fermentation") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (non-glycolytic fermentation) AnnotationAssertion(rdfs:label "non-glycolytic fermentation") @@ -127790,22 +127685,24 @@ SubClassOf( (mixed acid fermentation) AnnotationAssertion(rdfs:label "mixed acid fermentation") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) -SubClassOf( ) +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ) -SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (anaerobic amino acid catabolic process) @@ -127813,12 +127710,18 @@ AnnotationAssertion(rdfs:label "anae SubClassOf( ) SubClassOf( ) +# Class: (anaerobic catabolism of pairs of amino acids) + +AnnotationAssertion(rdfs:label "anaerobic catabolism of pairs of amino acids") +SubClassOf( ) + # Class: (anaerobic glycine catabolic process) AnnotationAssertion(rdfs:label "anaerobic glycine catabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (anaerobic L-glutamate catabolic process) @@ -128611,7 +128514,7 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (cell proliferation in hindbrain) @@ -128620,7 +128523,7 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (cell migration in hindbrain) @@ -128629,7 +128532,7 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (diencephalon development) @@ -128726,7 +128629,7 @@ AnnotationAssertion(rdfs:label "rhom EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (midbrain-hindbrain boundary initiation) @@ -128737,7 +128640,7 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pons development) @@ -128798,7 +128701,7 @@ AnnotationAssertion(rdfs:label "midb EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (central nervous system formation) @@ -128898,7 +128801,7 @@ SubClassOf( ObjectSomeValuesFrom( "rhombomere 1 development") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rhombomere 2 development) @@ -128906,7 +128809,7 @@ SubClassOf( ObjectSomeValuesFrom( "rhombomere 2 development") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rhombomere 3 development) @@ -128914,7 +128817,7 @@ SubClassOf( ObjectSomeValuesFrom( "rhombomere 3 development") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rhombomere 4 development) @@ -128922,7 +128825,7 @@ SubClassOf( ObjectSomeValuesFrom( "rhombomere 4 development") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rhombomere 5 development) @@ -128930,7 +128833,7 @@ SubClassOf( ObjectSomeValuesFrom( "rhombomere 5 development") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rhombomere 6 development) @@ -128938,7 +128841,7 @@ SubClassOf( ObjectSomeValuesFrom( "rhombomere 6 development") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rhombomere 7 development) @@ -128946,7 +128849,7 @@ SubClassOf( ObjectSomeValuesFrom( "rhombomere 7 development") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rhombomere 8 development) @@ -128954,7 +128857,7 @@ SubClassOf( ObjectSomeValuesFrom( "rhombomere 8 development") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hindbrain morphogenesis) @@ -128963,7 +128866,7 @@ AnnotationAssertion(rdfs:label "hind EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hindbrain formation) @@ -128972,7 +128875,7 @@ AnnotationAssertion(rdfs:label "hind EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hindbrain maturation) @@ -128982,7 +128885,7 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (medulla oblongata morphogenesis) @@ -129091,7 +128994,7 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rhombomere morphogenesis) @@ -129100,7 +129003,7 @@ AnnotationAssertion(rdfs:label "rhom EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rhombomere formation) @@ -129109,7 +129012,7 @@ AnnotationAssertion(rdfs:label "rhom EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (abducens nerve morphogenesis) @@ -129478,7 +129381,7 @@ AnnotationAssertion(rdfs:label "rhom EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rhombomere 1 formation) @@ -129487,7 +129390,7 @@ AnnotationAssertion(rdfs:label "rhom EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rhombomere boundary formation) @@ -129496,7 +129399,7 @@ AnnotationAssertion(rdfs:label "rhom EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rhombomere 2 morphogenesis) @@ -129505,7 +129408,7 @@ AnnotationAssertion(rdfs:label "rhom EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rhombomere 2 formation) @@ -129514,7 +129417,7 @@ AnnotationAssertion(rdfs:label "rhom EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rhombomere 3 morphogenesis) @@ -129523,7 +129426,7 @@ AnnotationAssertion(rdfs:label "rhom EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rhombomere 3 formation) @@ -129532,7 +129435,7 @@ AnnotationAssertion(rdfs:label "rhom EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rhombomere 4 morphogenesis) @@ -129541,7 +129444,7 @@ AnnotationAssertion(rdfs:label "rhom EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rhombomere 4 formation) @@ -129550,7 +129453,7 @@ AnnotationAssertion(rdfs:label "rhom EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rhombomere 5 morphogenesis) @@ -129559,7 +129462,7 @@ AnnotationAssertion(rdfs:label "rhom EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rhombomere 5 formation) @@ -129568,7 +129471,7 @@ AnnotationAssertion(rdfs:label "rhom EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rhombomere 6 morphogenesis) @@ -129577,7 +129480,7 @@ AnnotationAssertion(rdfs:label "rhom EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rhombomere 6 formation) @@ -129586,7 +129489,7 @@ AnnotationAssertion(rdfs:label "rhom EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lateral ventricle development) @@ -129605,7 +129508,7 @@ AnnotationAssertion(rdfs:label "rhom EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rhombomere 7 formation) @@ -129614,7 +129517,7 @@ AnnotationAssertion(rdfs:label "rhom EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rhombomere 8 morphogenesis) @@ -129623,7 +129526,7 @@ AnnotationAssertion(rdfs:label "rhom EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nerve development) @@ -129641,7 +129544,7 @@ AnnotationAssertion(rdfs:label "rhom EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (third ventricle development) @@ -129988,7 +129891,7 @@ AnnotationAssertion(rdfs:label "trig EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (trigeminal motor nucleus development) @@ -130006,7 +129909,7 @@ AnnotationAssertion(rdfs:label "midb EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dentate nucleus development) @@ -130122,7 +130025,7 @@ AnnotationAssertion(rdfs:label "stri EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (caudate nucleus development) @@ -130131,7 +130034,7 @@ AnnotationAssertion(rdfs:label "caud EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (putamen development) @@ -130140,7 +130043,7 @@ AnnotationAssertion(rdfs:label "puta EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (globus pallidus development) @@ -130185,7 +130088,7 @@ AnnotationAssertion(rdfs:label "amyg EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cingulate gyrus development) @@ -130224,7 +130127,7 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (orbitofrontal cortex development) @@ -130270,7 +130173,7 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (oligodendrocyte cell fate specification) @@ -130461,7 +130364,7 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hypothalamus development) @@ -130514,7 +130417,7 @@ SubClassOf( ObjectSomeValuesFrom( "Cajal-Retzius cell differentiation") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (forebrain generation of neurons) @@ -130582,7 +130485,7 @@ AnnotationAssertion(rdfs:label "cere EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cerebral cortex GABAergic interneuron fate commitment) @@ -130591,7 +130494,7 @@ AnnotationAssertion(rdfs:label "cere EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cerebral cortex GABAergic interneuron development) @@ -130600,7 +130503,7 @@ AnnotationAssertion(rdfs:label "cere EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cerebral cortex neuron differentiation) @@ -130608,7 +130511,7 @@ SubClassOf( ObjectSomeValuesFrom( "cerebral cortex neuron differentiation") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (forebrain astrocyte differentiation) @@ -130679,20 +130582,20 @@ SubClassOf( ObjectSomeValuesFrom( "cell proliferation in external granule layer") SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (cerebellar granule cell precursor proliferation) AnnotationAssertion(rdfs:label "cerebellar granule cell precursor proliferation") SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (regulation of cerebellar granule cell precursor proliferation) AnnotationAssertion(rdfs:label "regulation of cerebellar granule cell precursor proliferation") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (positive regulation of cerebellar granule cell precursor proliferation) @@ -130701,7 +130604,7 @@ AnnotationAssertion(rdfs:label "posi EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (negative regulation of cerebellar granule cell precursor proliferation) @@ -130710,7 +130613,7 @@ AnnotationAssertion(rdfs:label "nega EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (central nervous system projection neuron axonogenesis) @@ -130993,7 +130896,7 @@ AnnotationAssertion(rdfs:label "rhom EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metencephalon development) @@ -131002,7 +130905,7 @@ AnnotationAssertion(rdfs:label "mete EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (corpus callosum development) @@ -131301,7 +131204,6 @@ SubClassOf( ObjectSomeValuesFrom( "alanine transmembrane transporter activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -131314,19 +131216,12 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (inorganic cation transmembrane transporter activity) - -AnnotationAssertion(rdfs:label "inorganic cation transmembrane transporter activity") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (regulation of transmembrane transporter activity) AnnotationAssertion(rdfs:label "regulation of transmembrane transporter activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (signal transduction involved in regulation of gene expression) @@ -131768,7 +131663,7 @@ SubClassOf( ObjectSomeValuesFrom( "nitric oxide transmembrane transporter activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -133198,7 +133093,7 @@ AnnotationAssertion(rdfs:label "hind EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (notochord development) @@ -133245,7 +133140,7 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (transmembrane collagen trimer) @@ -133775,32 +133670,6 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (regulation of sulfur amino acid metabolic process) - -AnnotationAssertion(rdfs:label "regulation of sulfur amino acid metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (negative regulation of sulfur amino acid metabolic process) - -AnnotationAssertion(rdfs:label "negative regulation of sulfur amino acid metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (positive regulation of sulfur amino acid metabolic process) - -AnnotationAssertion(rdfs:label "positive regulation of sulfur amino acid metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (regulation of vesicle fusion) AnnotationAssertion(rdfs:label "regulation of vesicle fusion") @@ -134094,6 +133963,35 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (regulation of heterochromatin formation) + +AnnotationAssertion(rdfs:label "regulation of heterochromatin formation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (negative regulation of heterochromatin formation) + +AnnotationAssertion(rdfs:label "negative regulation of heterochromatin formation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (positive regulation of heterochromatin formation) + +AnnotationAssertion(rdfs:label "positive regulation of heterochromatin formation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (nucleosome binding) AnnotationAssertion(rdfs:label "nucleosome binding") @@ -134109,6 +134007,18 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (heterochromatin formation) + +AnnotationAssertion(rdfs:label "heterochromatin formation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (motile cilium) AnnotationAssertion(rdfs:label "motile cilium") @@ -134190,7 +134100,7 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (regulation of fever generation) @@ -134547,24 +134457,6 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (negative regulation of glucocorticoid metabolic process) - -AnnotationAssertion(rdfs:label "negative regulation of glucocorticoid metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (positive regulation of glucocorticoid metabolic process) - -AnnotationAssertion(rdfs:label "positive regulation of glucocorticoid metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (regulation of glucocorticoid biosynthetic process) AnnotationAssertion(rdfs:label "regulation of glucocorticoid biosynthetic process") @@ -134577,7 +134469,6 @@ SubClassOf( ObjectSomeValuesFrom( "negative regulation of glucocorticoid biosynthetic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -134586,7 +134477,6 @@ SubClassOf( ObjectSomeValuesFrom( "positive regulation of glucocorticoid biosynthetic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -134603,8 +134493,8 @@ SubClassOf( ObjectSomeValuesFrom( "negative regulation of glucocorticoid catabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -134612,8 +134502,8 @@ SubClassOf( ObjectSomeValuesFrom( "positive regulation of glucocorticoid catabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -134837,35 +134727,11 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (negative regulation of nuclease activity) - -AnnotationAssertion(rdfs:label "negative regulation of nuclease activity") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (positive regulation of nuclease activity) - -AnnotationAssertion(rdfs:label "positive regulation of nuclease activity") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (negative regulation of deoxyribonuclease activity) - -AnnotationAssertion(rdfs:label "negative regulation of deoxyribonuclease activity") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (positive regulation of deoxyribonuclease activity) AnnotationAssertion(rdfs:label "positive regulation of deoxyribonuclease activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -135553,26 +135419,6 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (negative regulation of aldosterone metabolic process) - -AnnotationAssertion(rdfs:label "negative regulation of aldosterone metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (positive regulation of aldosterone metabolic process) - -AnnotationAssertion(rdfs:label "positive regulation of aldosterone metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (regulation of aldosterone biosynthetic process) AnnotationAssertion(rdfs:label "regulation of aldosterone biosynthetic process") @@ -135587,7 +135433,6 @@ SubClassOf( ObjectSomeValuesFrom( "negative regulation of aldosterone biosynthetic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) @@ -135597,7 +135442,6 @@ SubClassOf( ObjectSomeValuesFrom( "positive regulation of aldosterone biosynthetic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) @@ -135903,18 +135747,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (regulation of transporter activity) - -AnnotationAssertion(rdfs:label "regulation of transporter activity") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (negative regulation of transporter activity) AnnotationAssertion(rdfs:label "negative regulation of transporter activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -135923,24 +135759,16 @@ SubClassOf( ObjectSomeValuesFrom( "positive regulation of transporter activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (regulation of monoatomic ion transmembrane transporter activity) - -AnnotationAssertion(rdfs:label "regulation of monoatomic ion transmembrane transporter activity") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (negative regulation of ion transmembrane transporter activity) AnnotationAssertion(rdfs:label "negative regulation of ion transmembrane transporter activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -135948,8 +135776,8 @@ SubClassOf( ObjectSomeValuesFrom( "positive regulation of ion transmembrane transporter activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -138640,16 +138468,9 @@ SubClassOf( ObjectSomeValuesFrom( "negative regulation of glucokinase activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (positive regulation of glucokinase activity) - -AnnotationAssertion(rdfs:label "positive regulation of glucokinase activity") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (nuclear progesterone receptor binding) AnnotationAssertion(rdfs:label "nuclear progesterone receptor binding") @@ -138777,7 +138598,6 @@ SubClassOf( "cysteine transmembrane transporter activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -139288,8 +139108,8 @@ SubClassOf( ObjectSomeValuesFrom( "negative regulation of kinase activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (positive regulation of kinase activity) @@ -139297,8 +139117,8 @@ SubClassOf( ObjectSomeValuesFrom( "positive regulation of kinase activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (regulation of luteinizing hormone secretion) @@ -139364,6 +139184,13 @@ SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (heterochromatin boundary formation) + +AnnotationAssertion(rdfs:label "heterochromatin boundary formation") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (ribosome localization) AnnotationAssertion(rdfs:label "ribosome localization") @@ -139659,7 +139486,6 @@ SubClassOf( "ethanolamine transmembrane transporter activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -139744,18 +139570,10 @@ SubClassOf( ObjectSomeValuesFrom( "regulation of urea catabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) +SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (regulation of urea metabolic process) - -AnnotationAssertion(rdfs:label "regulation of urea metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (kynurenic acid metabolic process) AnnotationAssertion(rdfs:label "kynurenic acid metabolic process") @@ -140220,7 +140038,6 @@ SubClassOf( ObjectSomeValuesFrom( "glutathione transmembrane transporter activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) @@ -140398,7 +140215,6 @@ AnnotationAssertion(rdfs:label "iron EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (regulation of iron ion transport) @@ -141059,7 +140875,7 @@ SubClassOf( ObjectSomeValuesFrom( "regulation of dephosphorylation") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (negative regulation of dephosphorylation) @@ -141278,21 +141094,6 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) -# Class: (thioester metabolic process) - -AnnotationAssertion(rdfs:label "thioester metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (thioester biosynthetic process) - -AnnotationAssertion(rdfs:label "thioester biosynthetic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (protein localization to synapse) AnnotationAssertion(rdfs:label "protein localization to synapse") @@ -141314,7 +141115,7 @@ AnnotationAssertion(rdfs:comment "No AnnotationAssertion(rdfs:label "phosphate ion transmembrane transport") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) +SubClassOf( ) # Class: (triose phosphate transmembrane transport) @@ -141872,6 +141673,14 @@ SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (tRNA import into nucleus) + +AnnotationAssertion(rdfs:label "tRNA import into nucleus") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (interleukin-15-mediated signaling pathway) AnnotationAssertion(rdfs:label "interleukin-15-mediated signaling pathway") @@ -141885,7 +141694,6 @@ AnnotationAssertion(rdfs:label "sodi EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (hepatic stellate cell activation) @@ -143812,6 +143620,12 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (epigenetic regulation of gene expression) + +AnnotationAssertion(rdfs:label "epigenetic regulation of gene expression") +SubClassOf( ) +SubClassOf( ) + # Class: (regulation of development, heterochronic) AnnotationAssertion(rdfs:label "regulation of development, heterochronic") @@ -144541,7 +144355,7 @@ SubClassOf( ObjectComplementOf(Object AnnotationAssertion(rdfs:comment "Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC.") AnnotationAssertion(rdfs:label "regulation of phosphorylation") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (negative regulation of phosphorylation) @@ -146052,8 +145866,9 @@ SubClassOf( ObjectSomeValuesFrom( "alkanesulfonate transmembrane transport") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) +SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (benzoate transport) @@ -146131,7 +145946,6 @@ SubClassOf( ObjectSomeValuesFrom( "D-serine transmembrane transporter activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -146336,6 +146150,17 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (amino acid activation) + +AnnotationAssertion(rdfs:label "amino acid activation") +SubClassOf( ) + +# Class: (tRNA aminoacylation) + +AnnotationAssertion(rdfs:label "tRNA aminoacylation") +SubClassOf( ) +SubClassOf( ) + # Class: (peptide biosynthetic process) AnnotationAssertion(rdfs:label "peptide biosynthetic process") @@ -147492,12 +147317,6 @@ SubClassOf( ObjectSomeValuesFrom( "macromolecule modification") SubClassOf( ) -# Class: (macromolecule glycosylation) - -AnnotationAssertion(rdfs:label "macromolecule glycosylation") -SubClassOf( ) -SubClassOf( ) - # Class: (positive regulation of skeletal muscle tissue regeneration) AnnotationAssertion(rdfs:label "positive regulation of skeletal muscle tissue regeneration") @@ -147578,18 +147397,10 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (alkane metabolic process) - -AnnotationAssertion(rdfs:label "alkane metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (alkane biosynthetic process) AnnotationAssertion(rdfs:label "alkane biosynthetic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -147597,22 +147408,13 @@ SubClassOf( ObjectSomeValuesFrom( "alkane catabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (alkene metabolic process) - -AnnotationAssertion(rdfs:label "alkene metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (alkene biosynthetic process) AnnotationAssertion(rdfs:label "alkene biosynthetic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -147620,9 +147422,9 @@ SubClassOf( ObjectSomeValuesFrom( "alkene catabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (regulation of secondary metabolic process) @@ -147704,14 +147506,6 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (pigment metabolic process involved in pigment accumulation) - -AnnotationAssertion(rdfs:label "pigment metabolic process involved in pigment accumulation") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (pigment accumulation) AnnotationAssertion(rdfs:label "pigment accumulation") @@ -147723,8 +147517,9 @@ SubClassOf( ObjectSomeValuesFrom( "pigment biosynthetic process involved in pigment accumulation") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cellular pigment accumulation) @@ -148120,7 +147915,6 @@ SubClassOf( ObjectSomeValuesFrom( "methionine transmembrane transporter activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -148534,6 +148328,13 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (response to amylopectin) + +AnnotationAssertion(rdfs:label "response to amylopectin") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (doxorubicin metabolic process) AnnotationAssertion(rdfs:label "doxorubicin metabolic process") @@ -148795,7 +148596,6 @@ AnnotationAssertion(rdfs:label "nega EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (plasma membrane fusion) @@ -149289,7 +149089,6 @@ AnnotationAssertion(rdfs:label "posi EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (fat cell differentiation) @@ -150564,17 +150363,6 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (positive regulation of epidermal growth factor-activated receptor activity) - -AnnotationAssertion(rdfs:label "positive regulation of epidermal growth factor-activated receptor activity") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) -SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) -SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (positive regulation of epidermal growth factor receptor signaling pathway) AnnotationAssertion(rdfs:label "positive regulation of epidermal growth factor receptor signaling pathway") @@ -150783,6 +150571,12 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (negative regulation of gene expression, epigenetic) + +AnnotationAssertion(rdfs:label "negative regulation of gene expression, epigenetic") +SubClassOf( ) +SubClassOf( ) + # Class: (negative regulation of glycogen catabolic process) AnnotationAssertion(rdfs:label "negative regulation of glycogen catabolic process") @@ -150863,14 +150657,6 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (positive regulation of isoprenoid metabolic process) - -AnnotationAssertion(rdfs:label "positive regulation of isoprenoid metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (negative regulation of isotype switching) AnnotationAssertion(rdfs:label "negative regulation of isotype switching") @@ -151153,22 +150939,6 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (negative regulation of catecholamine metabolic process) - -AnnotationAssertion(rdfs:label "negative regulation of catecholamine metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (positive regulation of catecholamine metabolic process) - -AnnotationAssertion(rdfs:label "positive regulation of catecholamine metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (negative regulation of complement activation) AnnotationAssertion(rdfs:label "negative regulation of complement activation") @@ -151285,20 +151055,11 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (positive regulation of nucleobase-containing compound metabolic process) - -AnnotationAssertion(rdfs:label "positive regulation of nucleobase-containing compound metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (negative regulation of phosphate metabolic process) AnnotationAssertion(rdfs:label "negative regulation of phosphate metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (positive regulation of phosphate metabolic process) @@ -151306,7 +151067,6 @@ SubClassOf( ObjectSomeValuesFrom( "positive regulation of phosphate metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (negative regulation of steroid metabolic process) @@ -151427,8 +151187,8 @@ SubClassOf( ObjectSomeValuesFrom( "negative regulation of dopamine metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) @@ -151436,8 +151196,8 @@ SubClassOf( ObjectSomeValuesFrom( "positive regulation of dopamine metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) @@ -151455,7 +151215,6 @@ SubClassOf( ObjectSomeValuesFrom( "positive regulation of nucleoside metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -151474,7 +151233,6 @@ SubClassOf( ObjectSomeValuesFrom( "positive regulation of nucleotide metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -151493,7 +151251,6 @@ SubClassOf( ObjectSomeValuesFrom( "positive regulation of purine nucleobase metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -151501,7 +151258,6 @@ SubClassOf( ObjectSomeValuesFrom( "negative regulation of pyrimidine nucleobase metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -151510,8 +151266,7 @@ SubClassOf( ObjectSomeValuesFrom( "positive regulation of pyrimidine nucleobase metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -152459,7 +152214,6 @@ SubClassOf( ObjectSomeValuesFrom( "L-cysteine metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -152471,13 +152225,6 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (tropane alkaloid metabolic process) - -AnnotationAssertion(rdfs:label "tropane alkaloid metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (creatinine metabolic process) AnnotationAssertion(rdfs:label "creatinine metabolic process") @@ -152585,15 +152332,6 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (glycosylceramide biosynthetic process) - -AnnotationAssertion(rdfs:label "glycosylceramide biosynthetic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (glycosylceramide catabolic process) AnnotationAssertion(rdfs:label "glycosylceramide catabolic process") @@ -152641,14 +152379,6 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (nicotinate nucleotide metabolic process) - -AnnotationAssertion(rdfs:label "nicotinate nucleotide metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (S-adenosylhomocysteine metabolic process) AnnotationAssertion(rdfs:label "S-adenosylhomocysteine metabolic process") @@ -153579,7 +153309,6 @@ SubClassOf( ObjectSomeValuesFrom( "metal ion transmembrane transporter activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -153829,8 +153558,7 @@ SubClassOf( ObjectSomeValuesFrom( "carboxylic acid transmembrane transporter activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -156494,9 +156222,7 @@ SubClassOf( ObjectSomeValuesFrom( "sensory system development") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) -SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (peripheral nervous system neuron differentiation) @@ -156629,14 +156355,6 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (regulation of homocysteine metabolic process) - -AnnotationAssertion(rdfs:label "regulation of homocysteine metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (homocysteine metabolic process) AnnotationAssertion(rdfs:label "homocysteine metabolic process") @@ -156646,24 +156364,6 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (positive regulation of homocysteine metabolic process) - -AnnotationAssertion(rdfs:label "positive regulation of homocysteine metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (negative regulation of homocysteine metabolic process) - -AnnotationAssertion(rdfs:label "negative regulation of homocysteine metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (regulation of lymphocyte proliferation) AnnotationAssertion(rdfs:label "regulation of lymphocyte proliferation") @@ -157022,19 +156722,11 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (cocaine metabolic process) - -AnnotationAssertion(rdfs:label "cocaine metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (cocaine catabolic process) AnnotationAssertion(rdfs:label "cocaine catabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (regulation of biological process) @@ -157101,7 +156793,6 @@ SubClassOf( ObjectSomeValuesFrom( "cocaine biosynthetic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (monoatomic ion homeostasis) @@ -157178,9 +156869,9 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (coagulation) @@ -157851,11 +157542,6 @@ SubClassOf( ObjectSomeValuesFrom( "GTPase binding") SubClassOf( ) -# Class: () - -AnnotationAssertion( ) -AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) - # Class: (DNA transport) AnnotationAssertion(rdfs:label "DNA transport") @@ -157877,6 +157563,13 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (tRNA transport) + +AnnotationAssertion(rdfs:label "tRNA transport") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (nucleic acid transmembrane transporter activity) AnnotationAssertion(rdfs:label "nucleic acid transmembrane transporter activity") @@ -157894,6 +157587,14 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (tRNA transmembrane transporter activity) + +AnnotationAssertion(rdfs:label "tRNA transmembrane transporter activity") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (DNA transmembrane transporter activity) AnnotationAssertion(rdfs:label "DNA transmembrane transporter activity") @@ -157977,7 +157678,6 @@ SubClassOf( ObjectSomeValuesFrom( "positive regulation of DNA metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -158355,22 +158055,6 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (negative regulation of sulfur metabolic process) - -AnnotationAssertion(rdfs:label "negative regulation of sulfur metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (positive regulation of sulfur metabolic process) - -AnnotationAssertion(rdfs:label "positive regulation of sulfur metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (localization) AnnotationAssertion(rdfs:label "localization") @@ -158593,7 +158277,6 @@ SubClassOf( ObjectSomeValuesFrom( "positive regulation of RNA metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -158877,24 +158560,6 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (positive regulation of transferase activity) - -AnnotationAssertion(rdfs:comment "This term is useful for grouping, but is too general for manual annotation. Please use a child term instead.") -AnnotationAssertion(rdfs:label "positive regulation of transferase activity") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (negative regulation of transferase activity) - -AnnotationAssertion(rdfs:comment "This term is useful for grouping, but is too general for manual annotation. Please use a child term instead.") -AnnotationAssertion(rdfs:label "negative regulation of transferase activity") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (positive regulation of lyase activity) AnnotationAssertion(rdfs:label "positive regulation of lyase activity") @@ -158902,13 +158567,6 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (negative regulation of lyase activity) - -AnnotationAssertion(rdfs:label "negative regulation of lyase activity") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (positive regulation of ligase activity) AnnotationAssertion(rdfs:label "positive regulation of ligase activity") @@ -161253,32 +160911,6 @@ SubClassOf( ObjectComplementOf(Object SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (regulation of protein glycosylation) - -AnnotationAssertion(rdfs:label "regulation of protein glycosylation") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (positive regulation of protein glycosylation) - -AnnotationAssertion(rdfs:label "positive regulation of protein glycosylation") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (negative regulation of protein glycosylation) - -AnnotationAssertion(rdfs:label "negative regulation of protein glycosylation") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (positive regulation of epithelial cell proliferation involved in wound healing) AnnotationAssertion(rdfs:label "positive regulation of epithelial cell proliferation involved in wound healing") @@ -162691,14 +162323,6 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (negative regulation of acetylcholine metabolic process) - -AnnotationAssertion(rdfs:label "negative regulation of acetylcholine metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (cardiac septum morphogenesis) AnnotationAssertion(rdfs:label "cardiac septum morphogenesis") @@ -163684,6 +163308,21 @@ AnnotationAssertion(rdfs:label "tube SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (cell-cell adhesion involved in sealing an epithelial fold) + +AnnotationAssertion(rdfs:label "cell-cell adhesion involved in sealing an epithelial fold") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (cell-cell adhesion involved in neural tube closure) + +AnnotationAssertion(rdfs:label "cell-cell adhesion involved in neural tube closure") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (mesenchymal cell differentiation involved in mammary gland development) AnnotationAssertion(rdfs:label "mesenchymal cell differentiation involved in mammary gland development") @@ -168010,7 +167649,6 @@ SubClassOf( ObjectSomeValuesFrom( "positive regulation of taurine biosynthetic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -168062,7 +167700,7 @@ SubClassOf( ObjectSomeValuesFrom( "regulation of L-glutamine biosynthetic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -168132,19 +167770,11 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (lutein metabolic process) - -AnnotationAssertion(rdfs:label "lutein metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (lutein biosynthetic process) AnnotationAssertion(rdfs:label "lutein biosynthetic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lutein catabolic process) @@ -168152,7 +167782,6 @@ SubClassOf( ObjectSomeValuesFrom( "lutein catabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (radial spoke assembly) @@ -168339,10 +167968,11 @@ SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) -# Class: (glycosylation) +# Class: (obsolete glycosylation) -AnnotationAssertion(rdfs:label "glycosylation") -SubClassOf( ) +AnnotationAssertion(rdfs:comment "The reason for obsoletion is that this term represents a molecular function.") +AnnotationAssertion(rdfs:label "obsolete glycosylation") +AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (chloride-activated potassium channel activity) @@ -169586,6 +169216,22 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (cell-cell adhesion involved in gastrulation) + +AnnotationAssertion(rdfs:label "cell-cell adhesion involved in gastrulation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (regulation of cell-cell adhesion involved in gastrulation) + +AnnotationAssertion(rdfs:label "regulation of cell-cell adhesion involved in gastrulation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (calcium ion transmembrane transport) AnnotationAssertion(rdfs:comment "Note that this term is not intended for use in annotating lateral movement within membranes.") @@ -169593,7 +169239,6 @@ AnnotationAssertion(rdfs:label "calc EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (regulation of protein processing) @@ -169750,6 +169395,13 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (heterochromatin organization) + +AnnotationAssertion(rdfs:label "heterochromatin organization") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (basement membrane assembly) AnnotationAssertion(rdfs:comment "Note that this term has no relationship to 'membrane assembly ; GO:0071709' because the basement membrane is not a lipid bilayer.") @@ -169793,7 +169445,7 @@ AnnotationAssertion(rdfs:label "regu EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -169802,8 +169454,8 @@ SubClassOf( ObjectSomeValuesFrom( "negative regulation of bile acid biosynthetic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -169812,8 +169464,8 @@ SubClassOf( ObjectSomeValuesFrom( "positive regulation of bile acid biosynthetic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -169980,7 +169632,7 @@ SubClassOf( ObjectSomeValuesFrom( "L-asparagine biosynthetic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -169991,6 +169643,8 @@ AnnotationAssertion(rdfs:label "L-as EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) +SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (SET domain binding) @@ -170873,8 +170527,8 @@ SubClassOf( ObjectSomeValuesFrom( "acyl-CoA biosynthetic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -171294,7 +170948,6 @@ AnnotationAssertion(rdfs:label "pota EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (protein transmembrane transport) @@ -173527,23 +173180,16 @@ SubClassOf( ObjectSomeValuesFrom( "Note that this term is not intended for use in annotating lateral movement within membranes.") AnnotationAssertion(rdfs:label "ammonium transmembrane transport") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (toluene-containing compound metabolic process) - -AnnotationAssertion(rdfs:label "toluene-containing compound metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (toluene-containing compound catabolic process) AnnotationAssertion(rdfs:label "toluene-containing compound catabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (seminiferous tubule development) @@ -174045,9 +173691,9 @@ AnnotationAssertion(rdfs:label "regu EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -175872,27 +175518,12 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (regulation of organofluorine metabolic process) - -AnnotationAssertion(rdfs:label "regulation of organofluorine metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (negative regulation of organohalogen metabolic process) - -AnnotationAssertion(rdfs:label "negative regulation of organohalogen metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (negative regulation of organofluorine metabolic process) AnnotationAssertion(rdfs:label "negative regulation of organofluorine metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) +SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (regulation of auxin metabolic process) @@ -176050,7 +175681,6 @@ AnnotationAssertion(rdfs:label "lith EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (glutamate transmembrane import into vacuole) @@ -176713,13 +176343,6 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (ammonium ion metabolic process) - -AnnotationAssertion(rdfs:label "ammonium ion metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (epoxide metabolic process) AnnotationAssertion(rdfs:label "epoxide metabolic process") @@ -177126,7 +176749,7 @@ AnnotationAssertion(rdfs:label "hipp EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (supramolecular fiber organization) @@ -177166,7 +176789,7 @@ SubClassOf( ObjectSomeValuesFrom( "hippocampal mossy fiber") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (ribbon synapse) @@ -177634,7 +177257,7 @@ AnnotationAssertion(rdfs:label "exci EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (inhibitory neuromuscular junction) @@ -177644,7 +177267,7 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (neuromuscular junction of skeletal muscle fiber) @@ -177655,7 +177278,7 @@ SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (neuromuscular junction of myotube) @@ -177664,7 +177287,7 @@ AnnotationAssertion(rdfs:label "neur EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (skeletal muscle fiber differentiation) @@ -177817,6 +177440,7 @@ SubClassOf( ObjectSomeValuesFrom( "fibrillar collagen") SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (complex of collagen trimers) @@ -177860,39 +177484,15 @@ SubClassOf( ObjectSomeValuesFrom( "inorganic anion import across plasma membrane") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ) # Class: (inorganic cation import across plasma membrane) AnnotationAssertion(rdfs:label "inorganic cation import across plasma membrane") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) - -# Class: (inorganic ion transmembrane transport) - -AnnotationAssertion(rdfs:comment "Note that this term is not intended for use in annotating lateral movement within membranes.") -AnnotationAssertion(rdfs:label "inorganic ion transmembrane transport") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (inorganic anion transmembrane transport) - -AnnotationAssertion(rdfs:comment "Note that this term is not intended for use in annotating lateral movement within membranes.") -AnnotationAssertion(rdfs:label "inorganic anion transmembrane transport") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) - -# Class: (inorganic cation transmembrane transport) - -AnnotationAssertion(rdfs:comment "Note that this term is not intended for use in annotating lateral movement within membranes.") -AnnotationAssertion(rdfs:label "inorganic cation transmembrane transport") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (G protein-coupled serotonin receptor signaling pathway) @@ -178387,6 +177987,7 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (endoplasmic reticulum subcompartment) @@ -178873,16 +178474,6 @@ SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (regulation of postsynaptic neurotransmitter receptor activity) - -AnnotationAssertion(rdfs:label "regulation of postsynaptic neurotransmitter receptor activity") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (exocytic insertion of neurotransmitter receptor to postsynaptic membrane) AnnotationAssertion(rdfs:label "exocytic insertion of neurotransmitter receptor to postsynaptic membrane") @@ -180048,8 +179639,8 @@ SubClassOf( ObjectSomeValuesFrom( "inorganic ion import across plasma membrane") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (positive regulation of postsynaptic cytosolic calcium concentration) @@ -180431,16 +180022,16 @@ SubClassOf( ObjectSomeValuesFrom( "positive regulation of cobalamin metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (negative regulation of cobalamin metabolic process) AnnotationAssertion(rdfs:label "negative regulation of cobalamin metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (regulation of vesicle fusion with Golgi apparatus) @@ -180473,7 +180064,7 @@ AnnotationAssertion(rdfs:label "regu EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -180493,7 +180084,6 @@ SubClassOf( ObjectSomeValuesFrom( "positive regulation of UDP-N-acetylglucosamine biosynthetic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) @@ -181219,52 +180809,6 @@ SubClassOf( ObjectComplementOf(Object SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (terminal acetylenic compound biosynthetic process) - -AnnotationAssertion(rdfs:label "terminal acetylenic compound biosynthetic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (terminal acetylenic compound metabolic process) - -AnnotationAssertion(rdfs:label "terminal acetylenic compound metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (terminal acetylenic compound catabolic process) - -AnnotationAssertion(rdfs:label "terminal acetylenic compound catabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (acetylenic compound metabolic process) - -AnnotationAssertion(rdfs:label "acetylenic compound metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (acetylenic compound biosynthetic process) - -AnnotationAssertion(rdfs:label "acetylenic compound biosynthetic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (acetylenic compound catabolic process) - -AnnotationAssertion(rdfs:label "acetylenic compound catabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (hydrocarbon biosynthetic process) AnnotationAssertion(rdfs:label "hydrocarbon biosynthetic process") @@ -181311,6 +180855,29 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (regulation of heterochromatin organization) + +AnnotationAssertion(rdfs:label "regulation of heterochromatin organization") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (negative regulation of heterochromatin organization) + +AnnotationAssertion(rdfs:label "negative regulation of heterochromatin organization") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (positive regulation of heterochromatin organization) + +AnnotationAssertion(rdfs:label "positive regulation of heterochromatin organization") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (cerebral blood circulation) AnnotationAssertion(rdfs:label "cerebral blood circulation") @@ -181523,7 +181090,6 @@ SubClassOf( ObjectSomeValuesFrom( "hydrogen peroxide channel activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -181571,6 +181137,14 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (catalytic activity, acting on a tRNA) + +AnnotationAssertion(rdfs:comment "Note that this term excludes activities for which a charged tRNA acts as an amino acid donor.") +AnnotationAssertion(rdfs:label "catalytic activity, acting on a tRNA") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (catalytic activity, acting on a rRNA) AnnotationAssertion(rdfs:label "catalytic activity, acting on a rRNA") @@ -181650,6 +181224,12 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (solid phase of basement membrane) + +AnnotationAssertion(rdfs:label "solid phase of basement membrane") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (mitochondrial guanine nucleotide transmembrane transport) AnnotationAssertion(rdfs:label "mitochondrial guanine nucleotide transmembrane transport") @@ -181664,6 +181244,12 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (collagenous component of basement membrane) + +AnnotationAssertion(rdfs:label "collagenous component of basement membrane") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (calcium ion import into vacuole) AnnotationAssertion(rdfs:label "calcium ion import into vacuole") @@ -181674,6 +181260,25 @@ SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (solid phase of interstitial matrix) + +AnnotationAssertion(rdfs:label "solid phase of interstitial matrix") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (collagenous component of interstitial matrix) + +AnnotationAssertion(rdfs:label "collagenous component of interstitial matrix") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (chicken-wire-like collagen network) + +AnnotationAssertion(rdfs:label "chicken-wire-like collagen network") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (ammonium import across plasma membrane) AnnotationAssertion(rdfs:label "ammonium import across plasma membrane") @@ -181696,9 +181301,7 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -182052,7 +181655,6 @@ SubClassOf( ObjectSomeValuesFrom( "5-aminolevulinic acid transmembrane transporter activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -182491,15 +182093,14 @@ SubClassOf( ObjectSomeValuesFrom( "visual system development") SubClassOf( ) -SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) -SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (positive regulation of protein-glutamine gamma-glutamyltransferase activity) AnnotationAssertion(rdfs:label "positive regulation of protein-glutamine gamma-glutamyltransferase activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (neuroinflammatory response) @@ -182626,22 +182227,6 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (positive regulation of phosphatidylcholine metabolic process) - -AnnotationAssertion(rdfs:label "positive regulation of phosphatidylcholine metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (negative regulation of phosphatidylcholine metabolic process) - -AnnotationAssertion(rdfs:label "negative regulation of phosphatidylcholine metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (regulation of phosphatidylethanolamine metabolic process) AnnotationAssertion(rdfs:label "regulation of phosphatidylethanolamine metabolic process") @@ -182649,22 +182234,6 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (positive regulation of phosphatidylethanolamine metabolic process) - -AnnotationAssertion(rdfs:label "positive regulation of phosphatidylethanolamine metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (negative regulation of phosphatidylethanolamine metabolic process) - -AnnotationAssertion(rdfs:label "negative regulation of phosphatidylethanolamine metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (transport across blood-cerebrospinal fluid barrier) AnnotationAssertion(rdfs:label "transport across blood-cerebrospinal fluid barrier") @@ -182764,9 +182333,7 @@ SubClassOf( ObjectSomeValuesFrom( "somatic sensory system development") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) -SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (serotonin-gated chloride channel activity) @@ -182915,7 +182482,6 @@ SubClassOf( ) SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -182941,13 +182507,14 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (beige fat cell differentiation) AnnotationAssertion(rdfs:label "beige fat cell differentiation") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (negative regulation of white fat cell differentiation) @@ -182962,10 +182529,20 @@ SubClassOf( ObjectSomeValuesFrom( "negative regulation of beige fat cell differentiation") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (protein biosynthetic process) + +AnnotationAssertion(rdfs:label "protein biosynthetic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (L-amino acid metabolic process) AnnotationAssertion(rdfs:label "L-amino acid metabolic process") @@ -183216,15 +182793,15 @@ SubClassOf( ObjectSomeValuesFrom( "regulation of sulfite transmembrane transport") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (positive regulation of sulfite transmembrane transport) AnnotationAssertion(rdfs:label "positive regulation of sulfite transmembrane transport") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (regulation of neuromuscular synaptic transmission) @@ -183392,14 +182969,6 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (positive regulation of receptor binding) - -AnnotationAssertion(rdfs:label "positive regulation of receptor binding") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (regulation of hyaluronan biosynthetic process) AnnotationAssertion(rdfs:label "regulation of hyaluronan biosynthetic process") @@ -184132,19 +183701,34 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (palmitic acid metabolic process) +# Class: (regulation of response to amylopectin) + +AnnotationAssertion(rdfs:label "regulation of response to amylopectin") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) -AnnotationAssertion(rdfs:label "palmitic acid metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +# Class: (negative regulation of response to amylopectin) + +AnnotationAssertion(rdfs:label "negative regulation of response to amylopectin") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (positive regulation of response to amylopectin) + +AnnotationAssertion(rdfs:label "positive regulation of response to amylopectin") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (palmitic acid catabolic process) AnnotationAssertion(rdfs:label "palmitic acid catabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (palmitic acid biosynthetic process) @@ -184152,7 +183736,6 @@ SubClassOf( ObjectSomeValuesFrom( "palmitic acid biosynthetic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (regulation of purine nucleotide metabolic process) @@ -184186,21 +183769,6 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (acetate ester metabolic process) - -AnnotationAssertion(rdfs:label "acetate ester metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (acetate ester biosynthetic process) - -AnnotationAssertion(rdfs:label "acetate ester biosynthetic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (olefin metabolic process) AnnotationAssertion(rdfs:label "olefin metabolic process") @@ -184222,7 +183790,7 @@ SubClassOf( ObjectSomeValuesFrom( "octadecene metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (octadecene biosynthetic process) @@ -184335,35 +183903,11 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (regulation of olefin metabolic process) - -AnnotationAssertion(rdfs:label "regulation of olefin metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (negative regulation of olefin metabolic process) - -AnnotationAssertion(rdfs:label "negative regulation of olefin metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (positive regulation of olefin metabolic process) - -AnnotationAssertion(rdfs:label "positive regulation of olefin metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (regulation of olefin biosynthetic process) AnnotationAssertion(rdfs:label "regulation of olefin biosynthetic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (negative regulation of olefin biosynthetic process) @@ -184371,7 +183915,6 @@ SubClassOf( ObjectSomeValuesFrom( "negative regulation of olefin biosynthetic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -184380,7 +183923,6 @@ SubClassOf( ObjectSomeValuesFrom( "positive regulation of olefin biosynthetic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -184389,7 +183931,6 @@ SubClassOf( ObjectSomeValuesFrom( "regulation of octadecene biosynthetic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (negative regulation of octadecene biosynthetic process) @@ -184398,7 +183939,6 @@ AnnotationAssertion(rdfs:label "nega EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (positive regulation of octadecene biosynthetic process) @@ -184407,32 +183947,8 @@ AnnotationAssertion(rdfs:label "posi EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (regulation of octadecene metabolic process) - -AnnotationAssertion(rdfs:label "regulation of octadecene metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (negative regulation of octadecene metabolic process) - -AnnotationAssertion(rdfs:label "negative regulation of octadecene metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (positive regulation of octadecene metabolic process) - -AnnotationAssertion(rdfs:label "positive regulation of octadecene metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (regulation of glycine import across plasma membrane) AnnotationAssertion(rdfs:label "regulation of glycine import across plasma membrane") @@ -184513,32 +184029,14 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (regulation of potassium ion transmembrane transporter activity) - -AnnotationAssertion(rdfs:label "regulation of potassium ion transmembrane transporter activity") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (negative regulation of potassium ion transmembrane transporter activity) AnnotationAssertion(rdfs:label "negative regulation of potassium ion transmembrane transporter activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (positive regulation of potassium ion transmembrane transporter activity) - -AnnotationAssertion(rdfs:label "positive regulation of potassium ion transmembrane transporter activity") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (negative regulation of calcium ion transmembrane transporter activity) AnnotationAssertion(rdfs:label "negative regulation of calcium ion transmembrane transporter activity") @@ -184625,19 +184123,11 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (glucosamine-containing compound metabolic process) - -AnnotationAssertion(rdfs:label "glucosamine-containing compound metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (glucosamine-containing compound catabolic process) AnnotationAssertion(rdfs:label "glucosamine-containing compound catabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (glucosamine-containing compound biosynthetic process) @@ -184645,7 +184135,6 @@ SubClassOf( ObjectSomeValuesFrom( "glucosamine-containing compound biosynthetic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (regulation of relaxation of muscle) @@ -184706,13 +184195,6 @@ SubClassOf( ObjectComplementOf(Object SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (acetate ester metabolic process involved in fermentation) - -AnnotationAssertion(rdfs:label "acetate ester metabolic process involved in fermentation") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (carbohydrate derivative metabolic process) AnnotationAssertion(rdfs:label "carbohydrate derivative metabolic process") @@ -185380,7 +184862,7 @@ SubClassOf( ObjectSomeValuesFrom( "regulation of voltage-gated calcium channel activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (negative regulation of voltage-gated calcium channel activity) @@ -185389,7 +184871,6 @@ AnnotationAssertion(rdfs:label "nega EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (positive regulation of voltage-gated calcium channel activity) @@ -185407,22 +184888,6 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (negative regulation of tetrapyrrole metabolic process) - -AnnotationAssertion(rdfs:label "negative regulation of tetrapyrrole metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (positive regulation of tetrapyrrole metabolic process) - -AnnotationAssertion(rdfs:label "positive regulation of tetrapyrrole metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (regulation of tetrapyrrole catabolic process) AnnotationAssertion(rdfs:label "regulation of tetrapyrrole catabolic process") @@ -185436,7 +184901,6 @@ SubClassOf( ObjectSomeValuesFrom( "negative regulation of tetrapyrrole catabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -185445,7 +184909,6 @@ SubClassOf( ObjectSomeValuesFrom( "positive regulation of tetrapyrrole catabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -185470,9 +184933,10 @@ SubClassOf( ObjectSomeValuesFrom( "positive regulation of tetrapyrrole biosynthetic process from glutamate") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (regulation of tetrapyrrole biosynthetic process from glycine and succinyl-CoA) @@ -185481,9 +184945,9 @@ AnnotationAssertion(rdfs:label "regu EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -185496,7 +184960,6 @@ SubClassOf( ) SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) @@ -185508,9 +184971,7 @@ AnnotationAssertion(rdfs:label "posi EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) @@ -185588,7 +185049,6 @@ SubClassOf( ObjectSomeValuesFrom( "regulation of toluene catabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (negative regulation of toluene catabolic process) @@ -185597,7 +185057,6 @@ AnnotationAssertion(rdfs:label "nega EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (positive regulation of toluene catabolic process) @@ -185606,32 +185065,8 @@ AnnotationAssertion(rdfs:label "posi EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (regulation of toluene metabolic process) - -AnnotationAssertion(rdfs:label "regulation of toluene metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (negative regulation of toluene metabolic process) - -AnnotationAssertion(rdfs:label "negative regulation of toluene metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (positive regulation of toluene metabolic process) - -AnnotationAssertion(rdfs:label "positive regulation of toluene metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (regulation of response to benzene) AnnotationAssertion(rdfs:label "regulation of response to benzene") @@ -185737,7 +185172,6 @@ SubClassOf( ObjectSomeValuesFrom( "negative regulation of tetrapyrrole biosynthetic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -185746,7 +185180,6 @@ SubClassOf( ObjectSomeValuesFrom( "positive regulation of tetrapyrrole biosynthetic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -185812,27 +185245,10 @@ SubClassOf( ObjectSomeValuesFrom( "regulation of cysteine metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) +SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (negative regulation of cysteine metabolic process) - -AnnotationAssertion(rdfs:label "negative regulation of cysteine metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (positive regulation of cysteine metabolic process) - -AnnotationAssertion(rdfs:label "positive regulation of cysteine metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (ether catabolic process) AnnotationAssertion(rdfs:label "ether catabolic process") @@ -185897,7 +185313,6 @@ SubClassOf( ObjectSomeValuesFrom( "positive regulation of anion channel activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -186284,19 +185699,11 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (glycosyl compound metabolic process) - -AnnotationAssertion(rdfs:label "glycosyl compound metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (glycosyl compound catabolic process) AnnotationAssertion(rdfs:label "glycosyl compound catabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (glycosyl compound biosynthetic process) @@ -186304,7 +185711,6 @@ SubClassOf( ObjectSomeValuesFrom( "glycosyl compound biosynthetic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (quinone metabolic process) @@ -186368,19 +185774,11 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (glutathione derivative metabolic process) - -AnnotationAssertion(rdfs:label "glutathione derivative metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (glutathione derivative catabolic process) AnnotationAssertion(rdfs:label "glutathione derivative catabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (glutathione derivative biosynthetic process) @@ -186388,7 +185786,6 @@ SubClassOf( ObjectSomeValuesFrom( "glutathione derivative biosynthetic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (proton binding) @@ -186569,19 +185966,11 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (prephenate(2-) metabolic process) - -AnnotationAssertion(rdfs:label "prephenate(2-) metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (prephenate(2-) catabolic process) AnnotationAssertion(rdfs:label "prephenate(2-) catabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (prephenate(2-) biosynthetic process) @@ -186589,7 +185978,6 @@ SubClassOf( ObjectSomeValuesFrom( "prephenate(2-) biosynthetic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (negative regulation of proteasomal protein catabolic process) @@ -186660,19 +186048,11 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (zeaxanthin metabolic process) - -AnnotationAssertion(rdfs:label "zeaxanthin metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (zeaxanthin catabolic process) AnnotationAssertion(rdfs:label "zeaxanthin catabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (zeaxanthin biosynthetic process) @@ -186680,7 +186060,6 @@ SubClassOf( ObjectSomeValuesFrom( "zeaxanthin biosynthetic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nicotinate metabolic process) @@ -186790,14 +186169,6 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (negative regulation of calcium ion binding) - -AnnotationAssertion(rdfs:label "negative regulation of calcium ion binding") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (regulation of protein depolymerization) AnnotationAssertion(rdfs:label "regulation of protein depolymerization") @@ -187159,8 +186530,8 @@ SubClassOf( ObjectSomeValuesFrom( "negative regulation of L-proline biosynthetic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -187692,22 +187063,6 @@ SubClassOf( ObjectComplementOf(Object SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (erythrose 4-phosphate/phosphoenolpyruvate family amino acid catabolic process) - -AnnotationAssertion(rdfs:label "erythrose 4-phosphate/phosphoenolpyruvate family amino acid catabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process) - -AnnotationAssertion(rdfs:label "erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (ketone body metabolic process) AnnotationAssertion(rdfs:label "ketone body metabolic process") @@ -187995,8 +187350,9 @@ SubClassOf( "sulfate transmembrane transport") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (melanocyte apoptotic process) @@ -188015,6 +187371,32 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (regulation of tRNA catabolic process) + +AnnotationAssertion(rdfs:label "regulation of tRNA catabolic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (negative regulation of tRNA catabolic process) + +AnnotationAssertion(rdfs:label "negative regulation of tRNA catabolic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (positive regulation of tRNA catabolic process) + +AnnotationAssertion(rdfs:label "positive regulation of tRNA catabolic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (negative regulation of mRNA catabolic process) AnnotationAssertion(rdfs:label "negative regulation of mRNA catabolic process") @@ -188129,7 +187511,6 @@ AnnotationAssertion(rdfs:label "chlo EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (protein localization to mitotic spindle) @@ -188335,19 +187716,11 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (regulation of catalase activity) - -AnnotationAssertion(rdfs:label "regulation of catalase activity") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (positive regulation of catalase activity) AnnotationAssertion(rdfs:label "positive regulation of catalase activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (serine/threonine protein kinase complex) @@ -188422,7 +187795,6 @@ SubClassOf( ObjectSomeValuesFrom( "proton transmembrane transport") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (carnitine transmembrane transport) @@ -188490,19 +187862,10 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (propan-2-ol metabolic process) - -AnnotationAssertion(rdfs:label "propan-2-ol metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (propan-2-ol biosynthetic process) AnnotationAssertion(rdfs:label "propan-2-ol biosynthetic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -189377,7 +188740,6 @@ SubClassOf( ObjectSomeValuesFrom( "positive regulation of voltage-gated chloride channel activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (positive regulation of ER to Golgi vesicle-mediated transport) @@ -189598,16 +188960,6 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (regulation of acetylcholine-gated cation channel activity) - -AnnotationAssertion(rdfs:label "regulation of acetylcholine-gated cation channel activity") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (regulation of proteolysis involved in protein catabolic process) AnnotationAssertion(rdfs:comment "overexpression of cathepsin C propeptide significantly increased the degradation of intestinal alkaline phosphatase (IAP)") @@ -190163,20 +189515,13 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (regulation of glutathione peroxidase activity) - -AnnotationAssertion(rdfs:label "regulation of glutathione peroxidase activity") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (positive regulation of hydrogen peroxide catabolic process) AnnotationAssertion(rdfs:label "positive regulation of hydrogen peroxide catabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (regulation of potassium ion import) @@ -190253,14 +189598,6 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (negative regulation of hexokinase activity) - -AnnotationAssertion(rdfs:label "negative regulation of hexokinase activity") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (positive regulation of hexokinase activity) AnnotationAssertion(rdfs:label "positive regulation of hexokinase activity") @@ -190373,6 +189710,29 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (regulation of tRNA metabolic process) + +AnnotationAssertion(rdfs:label "regulation of tRNA metabolic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (negative regulation of tRNA metabolic process) + +AnnotationAssertion(rdfs:label "negative regulation of tRNA metabolic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (positive regulation of tRNA metabolic process) + +AnnotationAssertion(rdfs:label "positive regulation of tRNA metabolic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (regulation of vacuolar transport) AnnotationAssertion(rdfs:label "regulation of vacuolar transport") @@ -191319,7 +190679,7 @@ SubClassOf( "regulation of phospholipid metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (negative regulation of phospholipid metabolic process) @@ -191505,7 +190865,6 @@ AnnotationAssertion(rdfs:label "nega EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -191515,7 +190874,6 @@ AnnotationAssertion(rdfs:label "posi EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -191558,29 +190916,6 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (regulation of inorganic anion transmembrane transport) - -AnnotationAssertion(rdfs:label "regulation of inorganic anion transmembrane transport") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (negative regulation of inorganic anion transmembrane transport) - -AnnotationAssertion(rdfs:label "negative regulation of inorganic anion transmembrane transport") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (positive regulation of inorganic anion transmembrane transport) - -AnnotationAssertion(rdfs:label "positive regulation of inorganic anion transmembrane transport") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (L-leucine import across plasma membrane) AnnotationAssertion(rdfs:label "L-leucine import across plasma membrane") @@ -191646,24 +190981,15 @@ SubClassOf( "negative regulation of voltage-gated potassium channel activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (positive regulation of voltage-gated potassium channel activity) AnnotationAssertion(rdfs:label "positive regulation of voltage-gated potassium channel activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (organic acid transmembrane transport) - -AnnotationAssertion(rdfs:label "organic acid transmembrane transport") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) - # Class: (negative regulation of protein localization) AnnotationAssertion(rdfs:label "negative regulation of protein localization") @@ -192512,7 +191838,7 @@ SubClassOf( ObjectSomeValuesFrom( "positive regulation of carotenoid biosynthetic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -192757,7 +192083,6 @@ AnnotationAssertion(rdfs:label "iodi EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (regulation of iodide transport) @@ -192818,7 +192143,6 @@ SubClassOf( ObjectSomeValuesFrom( "regulation of iodide transmembrane transport") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -192827,7 +192151,6 @@ SubClassOf( ObjectSomeValuesFrom( "negative regulation of iodide transmembrane transport") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) @@ -192837,7 +192160,6 @@ SubClassOf( ObjectSomeValuesFrom( "positive regulation of iodide transmembrane transport") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) @@ -192868,32 +192190,6 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (regulation of bile acid metabolic process) - -AnnotationAssertion(rdfs:label "regulation of bile acid metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (negative regulation of bile acid metabolic process) - -AnnotationAssertion(rdfs:label "negative regulation of bile acid metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (positive regulation of bile acid metabolic process) - -AnnotationAssertion(rdfs:label "positive regulation of bile acid metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (regulation of Schwann cell chemotaxis) AnnotationAssertion(rdfs:label "regulation of Schwann cell chemotaxis") @@ -193352,22 +192648,6 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) -# Class: (negative regulation of nitric oxide metabolic process) - -AnnotationAssertion(rdfs:label "negative regulation of nitric oxide metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (positive regulation of nitric oxide metabolic process) - -AnnotationAssertion(rdfs:label "positive regulation of nitric oxide metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (melatonin binding) AnnotationAssertion(rdfs:label "melatonin binding") @@ -194460,7 +193740,6 @@ SubClassOf( ObjectSomeValuesFrom( "negative regulation of hydrogen sulfide biosynthetic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -194469,7 +193748,6 @@ SubClassOf( ObjectSomeValuesFrom( "positive regulation of hydrogen sulfide biosynthetic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -195197,7 +194475,7 @@ SubClassOf( ObjectSomeValuesFrom( "carboxylic acid transmembrane transport") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) +SubClassOf( ) # Class: (otic placode development) @@ -195585,7 +194863,6 @@ SubClassOf( ObjectSomeValuesFrom( "regulation of voltage-gated sodium channel activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (positive regulation of voltage-gated sodium channel activity) @@ -196289,21 +195566,12 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (ceramide phosphoethanolamine metabolic process) - -AnnotationAssertion(rdfs:label "ceramide phosphoethanolamine metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (ceramide phosphoethanolamine catabolic process) AnnotationAssertion(rdfs:label "ceramide phosphoethanolamine catabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ceramide phosphoethanolamine biosynthetic process) @@ -196312,7 +195580,6 @@ AnnotationAssertion(rdfs:label "cera EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (response to homocysteine) @@ -198046,7 +197313,6 @@ SubClassOf( ObjectSomeValuesFrom( "negative regulation of acetylcholine biosynthetic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -199534,14 +198800,14 @@ SubClassOf( ObjectSomeValuesFrom( "regulation of phosphate transmembrane transport") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (negative regulation of phosphate transmembrane transport) AnnotationAssertion(rdfs:label "negative regulation of phosphate transmembrane transport") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -199549,7 +198815,7 @@ SubClassOf( ObjectSomeValuesFrom( "positive regulation of phosphate transmembrane transport") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -199633,7 +198899,8 @@ SubClassOf( ObjectSomeValuesFrom( "regulation of glutamate metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (negative regulation of glutamate metabolic process) @@ -199645,40 +198912,14 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (positive regulation of glutamate metabolic process) - -AnnotationAssertion(rdfs:label "positive regulation of glutamate metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (regulation of L-proline metabolic process) AnnotationAssertion(rdfs:label "regulation of L-proline metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (negative regulation of L-proline metabolic process) - -AnnotationAssertion(rdfs:label "negative regulation of L-proline metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (positive regulation of L-proline metabolic process) - -AnnotationAssertion(rdfs:label "positive regulation of L-proline metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (regulation of testosterone biosynthetic process) AnnotationAssertion(rdfs:label "regulation of testosterone biosynthetic process") @@ -199724,6 +198965,35 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (regulation of tRNA export from nucleus) + +AnnotationAssertion(rdfs:label "regulation of tRNA export from nucleus") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (negative regulation of tRNA export from nucleus) + +AnnotationAssertion(rdfs:label "negative regulation of tRNA export from nucleus") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (positive regulation of tRNA export from nucleus) + +AnnotationAssertion(rdfs:label "positive regulation of tRNA export from nucleus") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (regulation of reproductive process) AnnotationAssertion(rdfs:label "regulation of reproductive process") @@ -200124,17 +199394,6 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (regulation of kainate selective glutamate receptor activity) - -AnnotationAssertion(rdfs:label "regulation of kainate selective glutamate receptor activity") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (regulation of T-helper 17 type immune response) AnnotationAssertion(rdfs:label "regulation of T-helper 17 type immune response") @@ -200304,22 +199563,6 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (negative regulation of oxygen metabolic process) - -AnnotationAssertion(rdfs:label "negative regulation of oxygen metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (positive regulation of oxygen metabolic process) - -AnnotationAssertion(rdfs:label "positive regulation of oxygen metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (regulation of reactive oxygen species metabolic process) AnnotationAssertion(rdfs:label "regulation of reactive oxygen species metabolic process") @@ -200788,14 +200031,6 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (positive regulation of peroxidase activity) - -AnnotationAssertion(rdfs:label "positive regulation of peroxidase activity") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (regulation of hematopoietic stem cell migration) AnnotationAssertion(rdfs:label "regulation of hematopoietic stem cell migration") @@ -201456,7 +200691,7 @@ SubClassOf( ObjectSomeValuesFrom( "regulation of sodium ion transmembrane transporter activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -202390,6 +201625,82 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (regulation of starch catabolic process) + +AnnotationAssertion(rdfs:label "regulation of starch catabolic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (negative regulation of starch catabolic process) + +AnnotationAssertion(rdfs:label "negative regulation of starch catabolic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (positive regulation of starch catabolic process) + +AnnotationAssertion(rdfs:label "positive regulation of starch catabolic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (amylopectin metabolic process) + +AnnotationAssertion(rdfs:label "amylopectin metabolic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (amylopectin catabolic process) + +AnnotationAssertion(rdfs:label "amylopectin catabolic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (regulation of starch metabolic process) + +AnnotationAssertion(rdfs:label "regulation of starch metabolic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (regulation of amylopectin catabolic process) + +AnnotationAssertion(rdfs:label "regulation of amylopectin catabolic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (negative regulation of amylopectin catabolic process) + +AnnotationAssertion(rdfs:label "negative regulation of amylopectin catabolic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (positive regulation of amylopectin catabolic process) + +AnnotationAssertion(rdfs:label "positive regulation of amylopectin catabolic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (regulation of pro-B cell differentiation) AnnotationAssertion(rdfs:label "regulation of pro-B cell differentiation") @@ -202697,6 +202008,13 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (amylopectin binding) + +AnnotationAssertion(rdfs:label "amylopectin binding") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (glycogen binding) AnnotationAssertion(rdfs:label "glycogen binding") @@ -202704,6 +202022,13 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (starch binding) + +AnnotationAssertion(rdfs:label "starch binding") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (methane biosynthetic process from formic acid) AnnotationAssertion(rdfs:label "methane biosynthetic process from formic acid") @@ -202852,7 +202177,6 @@ AnnotationAssertion(rdfs:label "nega EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -202861,8 +202185,8 @@ SubClassOf( ObjectSomeValuesFrom( "positive regulation of L-proline catabolic process to L-glutamate") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) -SubClassOf( ) +SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -203111,7 +202435,6 @@ SubClassOf( ObjectSomeValuesFrom( "negative regulation of phosphatidylcholine biosynthetic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -203120,7 +202443,6 @@ SubClassOf( ObjectSomeValuesFrom( "positive regulation of phosphatidylcholine biosynthetic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -203140,30 +202462,12 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (regulation of cation channel activity) - -AnnotationAssertion(rdfs:label "regulation of cation channel activity") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (negative regulation of cation channel activity) - -AnnotationAssertion(rdfs:label "negative regulation of cation channel activity") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (positive regulation of cation channel activity) AnnotationAssertion(rdfs:label "positive regulation of cation channel activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (regulation of semaphorin-plexin signaling pathway) @@ -203233,6 +202537,15 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (negative regulation of starch biosynthetic process) + +AnnotationAssertion(rdfs:label "negative regulation of starch biosynthetic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (All) AnnotationAssertion(rdfs:comment "Root of all terms in the Human Phenotype Ontology.") @@ -205481,10 +204794,10 @@ SubClassOf( ObjectSomeValuesFrom( (Irritability) -AnnotationAssertion( "A proneness to anger, i.e., a tendency to become easily bothered or annoyed.") +AnnotationAssertion(rdfs:comment "Consider the context of the individual experience; the state of being irritable implies a change from a recognized baseline. Irritability as a trait implies an enduring feature (years) of the individual.") AnnotationAssertion(rdfs:label "Irritability") EquivalentClasses( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) # Class: (Anxiety) @@ -205519,6 +204832,14 @@ EquivalentClasses( ObjectSomeValuesFr SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) +# Class: (Decreased nerve conduction velocity) + +AnnotationAssertion(rdfs:comment "Nerve conduction velocity is usually measured with surface electrodes placed on the skin over nerves at various locations. Following stimulation at one electrode, the speed at which the signal is propagated to other electrodes is recorded. Abnormal values may suggest demyelination, a conduction block, or axonopathy.") +AnnotationAssertion(rdfs:label "Decreased nerve conduction velocity") +EquivalentClasses( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) + # Class: (Sensory neuropathy) AnnotationAssertion(rdfs:label "Sensory neuropathy") @@ -206644,6 +205965,11 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) +# Class: (Abnormal nervous system electrophysiology) + +AnnotationAssertion(rdfs:label "Abnormal nervous system electrophysiology") +SubClassOf( ) + # Class: (Reduced tendon reflexes) AnnotationAssertion(rdfs:comment "The deep tendon reflex is a monosynaptic reflex arc with sensory and motor nerve components, but the arc is much more vulnerable to sensory nerve damage. Ankle plantar flexion is retained in all but the most severe peripheral neuropathies, and thus loss of the Achilles tendon reflex in an objective indication of a substantial sensory nerve defect.") @@ -208819,9 +208145,9 @@ EquivalentClasses( ObjectSomeValuesFr SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) -# Class: (Sleep abnormality) +# Class: (Sleep disturbance) -AnnotationAssertion(rdfs:label "Sleep abnormality") +AnnotationAssertion(rdfs:label "Sleep disturbance") EquivalentClasses( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) @@ -210298,6 +209624,14 @@ EquivalentClasses( ObjectSomeValuesFr SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) +# Class: (Abnormality of peripheral nerve conduction) + +AnnotationAssertion(rdfs:comment "A nerve conduction study (NCS) is commonly conducted together with electromyography in order to evaluate muscle disorders. For the NCS, dermal electrodes are placed at intervals over the nerve to be examined, and a low-intensity current is introduced to generate action potentials. The velocity of the action potential is related to the diameter of the nerve fiber and the presence of a myelin sheath. Diseases of the myelin sheath characteristically reduce the nerve conduction velocity (NCV). The amplitude of the response is also measured.") +AnnotationAssertion(rdfs:label "Abnormality of peripheral nerve conduction") +EquivalentClasses( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) + # Class: (Prolinuria) AnnotationAssertion(rdfs:comment "Normal urinary proline total (free and combined form) excretion is around 40 mg per 24 hours.") @@ -210613,7 +209947,7 @@ SubClassOf( ObjectSomeValuesFrom( (Elevated circulating creatine kinase concentration) -AnnotationAssertion(rdfs:comment "'has part' some ('increased amount' and ('inheres in' some (IMR_0002602 and ('part of' some blood))) and ('has modifier' some abnormal))") +AnnotationAssertion(rdfs:comment "Elevated serum creatine kinase (CK) activity is usually an indicator of muscle damage. Diseases with very high CK values include subtypes of muscular dystrophies, idiopathic inflammatory myopathies and metabolic myopathies. However, a normal or only slightly elevated CK value does not exclude the presence of a myopathy. The normal range in the blood circulation is 34-171 U/l in males and 34-145 U/l in females, but may vary according to the test used.") AnnotationAssertion(rdfs:label "Elevated circulating creatine kinase concentration") EquivalentClasses( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( )))) SubClassOf( ) @@ -214112,13 +213446,6 @@ EquivalentClasses( ObjectSomeValuesFr SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) -# Class: (Severe B lymphocytopenia) - -AnnotationAssertion(rdfs:label "Severe B lymphocytopenia") -EquivalentClasses( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) - # Class: (Abnormality of humoral immunity) AnnotationAssertion(rdfs:label "Abnormality of humoral immunity") @@ -218344,6 +217671,13 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) +# Class: (Decreased activity of mitochondrial respiratory chain) + +AnnotationAssertion(rdfs:label "Decreased activity of mitochondrial respiratory chain") +EquivalentClasses( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) + # Class: (Calf muscle hypertrophy) AnnotationAssertion(rdfs:comment "Distal lower limb hypertrophy") @@ -218392,9 +217726,9 @@ EquivalentClasses( ObjectSomeValuesFr SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( )))) -# Class: (Proximal muscle weakness in lower limbs) +# Class: (Proximal lower limb muscle weakness) -AnnotationAssertion(rdfs:label "Proximal muscle weakness in lower limbs") +AnnotationAssertion(rdfs:label "Proximal lower limb muscle weakness") EquivalentClasses( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) SubClassOf( ) SubClassOf( ) @@ -218518,7 +217852,6 @@ SubClassOf( ObjectSomeValuesFrom( "This finding can be due to peripheral neuropathy.") AnnotationAssertion(rdfs:label "Distal lower limb muscle weakness") SubClassOf( ) -SubClassOf( ) SubClassOf( ) # Class: (Loss of subcutaneous adipose tissue from upper limbs) @@ -226371,6 +225704,13 @@ EquivalentClasses( ObjectSomeValuesFr SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) +# Class: (Abnormality of mucopolysaccharide metabolism) + +AnnotationAssertion(rdfs:label "Abnormality of mucopolysaccharide metabolism") +EquivalentClasses( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) + # Class: (Abnormal circulating enzyme concentration) AnnotationAssertion( "The concentration or activity of an enzyme in the blood circulation is outside of the limits of the normal range.") @@ -227345,10 +226685,10 @@ EquivalentClasses( ObjectSomeValuesFr SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) -# Class: (Aplasia of the vestibular nerve.) +# Class: (Aplasia of the vestibular nerve) AnnotationAssertion(rdfs:comment "May be seen in CHARGE syndrome.") -AnnotationAssertion(rdfs:label "Aplasia of the vestibular nerve.") +AnnotationAssertion(rdfs:label "Aplasia of the vestibular nerve") EquivalentClasses( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) @@ -228092,6 +227432,20 @@ EquivalentClasses( ObjectSomeValuesFr SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) +# Class: (Abnormal activity of mitochondrial respiratory chain) + +AnnotationAssertion(rdfs:label "Abnormal activity of mitochondrial respiratory chain") +EquivalentClasses( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( )))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( )))) + +# Class: (Decreased activity of mitochondrial ATP synthase complex) + +AnnotationAssertion(rdfs:label "Decreased activity of mitochondrial ATP synthase complex") +EquivalentClasses( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) + # Class: (Short digit) AnnotationAssertion(rdfs:comment "Note that the term brachydactyly is reserved for specific patterns of short digits, see HP:0001156.") @@ -230146,26 +229500,26 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( )))) -# Class: (Abnormal proportion of regulatory T cells) +# Class: (Abnormal regulatory T cell proportion) AnnotationAssertion(rdfs:comment "Identification of Treg cells remains problematic, because accumulating evidence suggests that all the presently-used Treg markers (CD25, CTLA-4, GITR, LAG-3, CD127 and Foxp3) represent general T-cell activation markers, rather than being truly Treg-specific.") -AnnotationAssertion(rdfs:label "Abnormal proportion of regulatory T cells") +AnnotationAssertion(rdfs:label "Abnormal regulatory T cell proportion") EquivalentClasses( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) -# Class: (Increased proportion of regulatory T cells) +# Class: (Increased regulatory T cell proportion) AnnotationAssertion( "Abnormal increase of the regulatory (Treg) CD4+ T cell subpopulation, commonly characterized by the CD127lowCD25hi phenotype, with the optional additional positivity for FoxP3, measured as percentage of total CD4+ T cells in the blood, compared to a reference range for a given sex and age-group.") -AnnotationAssertion(rdfs:label "Increased proportion of regulatory T cells") +AnnotationAssertion(rdfs:label "Increased regulatory T cell proportion") EquivalentClasses( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) -# Class: (Decreased proportion of regulatory T cells) +# Class: (Decreased regulatory T cell proportion) AnnotationAssertion( "Abnormal decrease of the regulatory (Treg) CD4+ T cell subpopulation, commonly characterized by the CD127lowCD25hi phenotype, with the optional additional positivity for FoxP3, measured as percentage of total CD4+ T cells in the blood, compared to a reference range for a given sex and age-group.") -AnnotationAssertion(rdfs:label "Decreased proportion of regulatory T cells") +AnnotationAssertion(rdfs:label "Decreased regulatory T cell proportion") EquivalentClasses( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) @@ -230449,6 +229803,11 @@ EquivalentClasses( ObjectSomeValuesFr SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) +# Class: (Abnormal CD4+ T cell proportion) + +AnnotationAssertion(rdfs:label "Abnormal CD4+ T cell proportion") +SubClassOf( ) + # Class: (Abnormal esophagus physiology) AnnotationAssertion( "Any physiological abnormality of the esophagus.") @@ -230699,16 +230058,16 @@ SubClassOf( ObjectSomeValuesFrom( "Reduced proportion of CD4+ effector memory T cells") AnnotationAssertion(rdfs:label "Decreased CD4+ effector memory T cell proportion") EquivalentClasses( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) -# Class: (Increased proportion of CD4+ effector memory T cells) +# Class: (Increased CD4+ effector memory T cell proportion) AnnotationAssertion( "An abnormally increased proportion of effector memory CD4+ T cells. These are memory cells that are short-lived cells that migrate to the site of an infection and attempt to eliminate the pathogen. These cells may have a CD3/CD4/CD62L-/CD45RA phenotype.") AnnotationAssertion(rdfs:comment "Elevated proportion of CD4+ effector memory T cells") -AnnotationAssertion(rdfs:label "Increased proportion of CD4+ effector memory T cells") +AnnotationAssertion(rdfs:label "Increased CD4+ effector memory T cell proportion") EquivalentClasses( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) # Class: (Abnormal ureter morphology) @@ -230752,7 +230111,6 @@ SubClassOf( (Abnormal affect) -AnnotationAssertion( "An anomaly in intensity, frequency, or duration of the verbal or behavioral expression of emotions, feelings, or thoughts.") AnnotationAssertion(rdfs:comment "Affect includes a combination of emotion in terms of feelings and its expression either in the verbal or behavioral (action) level. Normal expressions are often relatively short lived and familiar to the person while pathological expressions may be intense and extended and considered out of character for the individual. Affect encompasses: 1) emotions, 2) volition, and 3) what is termed the intellect or cognitive elements expressing (communicating) emotion and volition. Affect includes an internal feeling (emotion), an internal drive (will), and a motor component expression (typically speech, but also reflected in thoughts).") AnnotationAssertion(rdfs:label "Abnormal affect") SubClassOf( ) @@ -230947,6 +230305,13 @@ EquivalentClasses( ObjectSomeValuesFr SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( )))) +# Class: (Abnormality of peripheral nervous system electrophysiology) + +AnnotationAssertion( "An abnormality of the function of the electrical signals with which peripheral nerve cells communicate with each other or with muscles.") +AnnotationAssertion(rdfs:label "Abnormality of peripheral nervous system electrophysiology") +SubClassOf( ) +SubClassOf( ) + # Class: (Abnormal peripheral nervous system synaptic transmission) AnnotationAssertion( "An anomaly in the communication from a neuron to a target across a synapse in the peripheral nervous system.") @@ -231901,16 +231266,16 @@ EquivalentClasses( ObjectSomeValuesFr SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) -# Class: (Decreased proportion of naive T cells) +# Class: (Decreased naive T cell proportion) -AnnotationAssertion(rdfs:label "Decreased proportion of naive T cells") +AnnotationAssertion(rdfs:label "Decreased naive T cell proportion") EquivalentClasses( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) -# Class: (Increased proportion of naive T cells) +# Class: (Increased naive T cell proportion) -AnnotationAssertion(rdfs:label "Increased proportion of naive T cells") +AnnotationAssertion(rdfs:label "Increased naive T cell proportion") EquivalentClasses( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) @@ -231954,6 +231319,12 @@ EquivalentClasses( ObjectSomeValuesFr SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) +# Class: (Dysregulated negative emotional state) + +AnnotationAssertion(rdfs:comment "Manifestations may be conveyed through self-report or observed through behavior, allowing applicability across the lifespan and in individuals with limited verbal communication. This term refers to an observed negative emotional state rather than enduring traits of personality or temperament.") +AnnotationAssertion(rdfs:label "Dysregulated negative emotional state") +SubClassOf( ) + # Class: (Abnormal mitral valve physiology) AnnotationAssertion( "Any functional anomaly of the mitral valve.") @@ -232493,21 +231864,21 @@ EquivalentClasses( ObjectSomeValuesFr SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( )))) -# Class: (Decreased proportion of CD4+ T cells) +# Class: (Decreased CD4+ T cell proportion) AnnotationAssertion( "Abnormal decrease of helper CD3+CD4+ T cells, measured as percentage of total CD3+ T cells in the blood, compared to a reference range for a given sex and age-group. These are usually measured within the TCR alpha/beta positive population.") -AnnotationAssertion(rdfs:label "Decreased proportion of CD4+ T cells") +AnnotationAssertion(rdfs:label "Decreased CD4+ T cell proportion") EquivalentClasses( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) -# Class: (Increased proportion of CD4+ T cells) +# Class: (Increased CD4+ T cell proportion) AnnotationAssertion( "Abnormal increase of helper CD3+CD4+ T cells, measured as percentage of total CD3+ T cells in the blood, compared to a reference range for a given sex and age-group. These are usually measured within the TCR alpha/beta positive population.") AnnotationAssertion(rdfs:comment "T helper cells (Th cells), also known as CD4+ cells or CD4-positive cells, are a type of T cell that play an important role in the adaptive immune system.") -AnnotationAssertion(rdfs:label "Increased proportion of CD4+ T cells") +AnnotationAssertion(rdfs:label "Increased CD4+ T cell proportion") EquivalentClasses( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) # Class: (Abnormal sebaceous gland morphology) @@ -233440,6 +232811,13 @@ EquivalentClasses( ObjectSomeValuesFr SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) +# Class: (Increased activity of mitochondrial respiratory chain) + +AnnotationAssertion(rdfs:label "Increased activity of mitochondrial respiratory chain") +EquivalentClasses( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) + # Class: (Protruding coccyx) AnnotationAssertion(rdfs:label "Protruding coccyx") @@ -233721,6 +233099,11 @@ AnnotationAssertion( "Abnormal sweat homeostasis") SubClassOf( ) +# Class: (Abnormal nerve conduction velocity) + +AnnotationAssertion(rdfs:label "Abnormal nerve conduction velocity") +SubClassOf( ) + # Class: (Abnormal circulating iron concentration) AnnotationAssertion( "The concentration of iron in the blood circulation is outside the limits of normal.") @@ -236141,6 +235524,14 @@ EquivalentClasses( ObjectSomeValuesFr SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) +# Class: (Decreased circulating vitamin C concentration) + +AnnotationAssertion( "The concentration of vitamin C in the blood circulation is below the lower limit of normal.") +AnnotationAssertion(rdfs:label "Decreased circulating vitamin C concentration") +EquivalentClasses( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) + # Class: (Abnormality of vitamin D metabolism) AnnotationAssertion(rdfs:label "Abnormality of vitamin D metabolism") @@ -236720,8 +236111,7 @@ SubClassOf( ObjectSomeValuesFrom( (Abnormal emotional state) -AnnotationAssertion( "Emotions are complex psychological states that involve three distinct components: a subjective experience, a physiological response, and a behavioral or expressive response. In an abnormal emotional state, an affected individual shows altered intensity, frequency, or duration of emotional experiences.") -AnnotationAssertion(rdfs:comment "When one is assessing whether an individual has an Abnormal emotional state, emphasis should be placed on the observed clinical phenomena and subjective perceptions of the person, without regard to interpretation of the possibility of causality or context.") +AnnotationAssertion(rdfs:comment "Emotions are complex psychological and physiological states that may include any combination of: a subjective internal experience, a physiological response, and a behavioral or expressive component. Behavioral expression is not required for the emotional state to be considered present or clinically relevant. The assessment of abnormal emotional states should consider sociocultural and individual context, as well as intra-individual baselines. The term 'abnormal' is used descriptively and non-pejoratively, to denote deviations from typical emotional patterns, which may or may not reach the threshold of clinical disorder.") AnnotationAssertion(rdfs:label "Abnormal emotional state") EquivalentClasses( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) SubClassOf( ) @@ -237539,34 +236929,33 @@ EquivalentClasses( ObjectSomeValuesFr SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( )))) -# Class: (Abnormal proportion of naive CD4+ T cells) +# Class: (Abnormal naive CD4+ T cell proportion) -AnnotationAssertion(rdfs:label "Abnormal proportion of naive CD4+ T cells") +AnnotationAssertion(rdfs:label "Abnormal naive CD4+ T cell proportion") EquivalentClasses( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) -# Class: (Increased proportion of naive CD4+ T cells) +# Class: (Increased naive CD4+ T cell proportion) -AnnotationAssertion(rdfs:label "Increased proportion of naive CD4+ T cells") +AnnotationAssertion(rdfs:label "Increased naive CD4+ T cell proportion") EquivalentClasses( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) SubClassOf( ) -SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) -# Class: (Decreased proportion of naive CD4+ T cells) +# Class: (Decreased naive CD4+ T cell proportion) -AnnotationAssertion(rdfs:label "Decreased proportion of naive CD4+ T cells") +AnnotationAssertion(rdfs:label "Decreased naive CD4+ T cell proportion") EquivalentClasses( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) -# Class: (Abnormal proportion of CD4+ memory T cells) +# Class: (Abnormal CD4+ memory T cell proportion) AnnotationAssertion(rdfs:comment "Unlike in CD8+ T cells, in CD4+ T cells the populations of central memory, effector memory and TEMRA cells are not easily measurable and or are of limited clinical utility. Therefore, generally, only the distinction between naive and memory CD4 T cells is made.") -AnnotationAssertion(rdfs:label "Abnormal proportion of CD4+ memory T cells") +AnnotationAssertion(rdfs:label "Abnormal CD4+ memory T cell proportion") EquivalentClasses( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) SubClassOf( ) SubClassOf( ) @@ -237603,9 +236992,9 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) -# Class: (Decreased proportion of CD4-positive memory T cells) +# Class: (Decreased CD4+ memory T cell proportion) -AnnotationAssertion(rdfs:label "Decreased proportion of CD4-positive memory T cells") +AnnotationAssertion(rdfs:label "Decreased CD4+ memory T cell proportion") EquivalentClasses( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) SubClassOf( ) SubClassOf( ) @@ -237627,12 +237016,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) -# Class: (Increased proportion of CD4+ memory T cells) +# Class: (Increased CD4+ memory T cell proportion) -AnnotationAssertion(rdfs:label "Increased proportion of CD4+ memory T cells") +AnnotationAssertion(rdfs:label "Increased CD4+ memory T cell proportion") EquivalentClasses( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) -SubClassOf( ) -SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) @@ -239265,7 +238652,7 @@ SubClassOf( (Social disinhibition) -AnnotationAssertion(rdfs:comment "A tendency to social disinhibition can be acquired after traumaticbrain injury and may be described as insensitivity to others. Manifestions of social disinhibition may include (1) insertion of poorly considered utterances including insensitive remarks,overly intimate information, sexual references, and swear words, (2) failure to adhereto the rules of discourse leading to poor turn-taking, excessive side tracks, off topics,and talking too much, and (3) speaking from an egocentric perspective, that is,lacking concern, selfishness, childishness, arguing, not getting along with others.") +AnnotationAssertion(rdfs:comment "A tendency to social disinhibition can be acquired after traumatic brain injury and may be described as insensitivity to others. Manifestions of social disinhibition may include (1) insertion of poorly considered utterances including insensitive remarks,overly intimate information, sexual references, and swear words, (2) failure to adhereto the rules of discourse leading to poor turn-taking, excessive side tracks, off topics,and talking too much, and (3) speaking from an egocentric perspective, that is,lacking concern, selfishness, childishness, arguing, not getting along with others.") AnnotationAssertion(rdfs:label "Social disinhibition") SubClassOf( ) SubClassOf( ) @@ -239562,6 +238949,7 @@ SubClassOf( ObjectSomeValuesFrom(< AnnotationAssertion(rdfs:label "disorder of methionine catabolism") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -239643,7 +239031,8 @@ SubClassOf( ObjectSomeValuesFrom(< AnnotationAssertion(rdfs:label "inborn serine deficiency") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (autosomal dominant disease) @@ -240041,14 +239430,6 @@ EquivalentClasses( ObjectIntersect SubClassOf( ) SubClassOf( ) -# Class: (benign glioma) - -AnnotationAssertion(rdfs:comment "The term is scheduled to be merged with MONDO:0021637 low grade glioma'. This ID will therefore be obsoleted and replaced with MONDO:0021637") -AnnotationAssertion(rdfs:label "benign glioma") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) - # Class: (cartilage cancer) AnnotationAssertion(rdfs:label "cartilage cancer") @@ -240993,7 +240374,6 @@ SubClassOf( "schwannoma of ureter") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) @@ -245634,6 +245014,15 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (gasserian ganglion meningioma) + +AnnotationAssertion(rdfs:label "gasserian ganglion meningioma") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (cholangiolocellular carcinoma) AnnotationAssertion(rdfs:label "cholangiolocellular carcinoma") @@ -245686,6 +245075,13 @@ EquivalentClasses( ObjectIntersect SubClassOf( ) SubClassOf( ) +# Class: (renal infectious disease) + +AnnotationAssertion(rdfs:label "renal infectious disease") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) + # Class: (laryngeal disorder) AnnotationAssertion(rdfs:label "laryngeal disorder") @@ -245705,7 +245101,6 @@ SubClassOf( "mediastinal schwannoma") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) @@ -249346,8 +248741,8 @@ SubClassOf( ObjectSomeValuesFrom(< AnnotationAssertion(rdfs:label "hypersensitivity pneumonitis, familial") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) +SubClassOf( ) # Class: (essential hypertension, genetic) @@ -249807,9 +249202,7 @@ SubClassOf( (congenital disorder of glycosylation) AnnotationAssertion(rdfs:label "congenital disorder of glycosylation") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (herpes simplex virus keratitis) @@ -251042,14 +250435,6 @@ EquivalentClasses( ObjectIntersect SubClassOf( ) SubClassOf( ) -# Class: (inborn disorder of serine family metabolism) - -AnnotationAssertion(rdfs:label "inborn disorder of serine family metabolism") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (sterol biosynthesis disorder) AnnotationAssertion(rdfs:label "sterol biosynthesis disorder") @@ -253645,6 +253030,7 @@ SubClassOf( (low grade glioma) +AnnotationAssertion(rdfs:comment "Low-grade glioma may also be referred to as benign glioma. These tumors can be separated into two clinically distinct subgroups. The first group is of focal, well-circumscribed lesions that notably are not associated with an increased risk of malignant transformation. Recurrence rates are low, and the prognosis for these patients is excellent. Diffuse gliomas are WHO grade II lesions with a more infiltrative pattern of growth and high propensity for recurrence. The term \"benign\" is a misnomer in many of these cases, as the natural history of these tumors is with malignant transformation and recurrence as grade III or grade IV tumors. PMID:37452934") AnnotationAssertion(rdfs:label "low grade glioma") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) @@ -254207,14 +253593,6 @@ EquivalentClasses( ObjectIntersect SubClassOf( ) SubClassOf( ) -# Class: (disorder of glycosylation) - -AnnotationAssertion(rdfs:comment "May be inborn or somatic, Reason of obsoletion: out of scope - MONDO:excludeHistoricalDisease. Term to consider: -") -AnnotationAssertion(rdfs:label "disorder of glycosylation") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (infectious otitis media) AnnotationAssertion(rdfs:label "infectious otitis media") @@ -254304,18 +253682,9 @@ SubClassOf( ObjectSomeValuesFrom(< AnnotationAssertion(rdfs:label "perceptual disorders") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (auditory perceptual disorders) - -AnnotationAssertion(rdfs:label "auditory perceptual disorders") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (nerve plexus disorder) AnnotationAssertion(rdfs:label "nerve plexus disorder") @@ -254831,6 +254200,13 @@ EquivalentClasses( ObjectIntersect SubClassOf( ) SubClassOf( ) +# Class: (inherited interstitial lung disease) + +AnnotationAssertion(rdfs:label "inherited interstitial lung disease") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) + # Class: (fungal keratitis) AnnotationAssertion(rdfs:label "fungal keratitis") @@ -255005,10 +254381,7 @@ SubClassOf( ObjectSomeValuesFrom(< AnnotationAssertion(rdfs:comment "Reason of obsoletion: out of scope - MONDO:excludeHistoricalDisease. Term to consider: -") AnnotationAssertion(rdfs:label "inborn disorder of aspartate family metabolism") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ) # Class: (inherited auditory system disease) @@ -255980,7 +255353,6 @@ SubClassOf( "carcinoid syndrome") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (migraine without aura) @@ -256211,6 +255583,13 @@ EquivalentClasses( ObjectIntersect SubClassOf( ) SubClassOf( ) +# Class: (brain stem glioblastoma) + +AnnotationAssertion(rdfs:label "brain stem glioblastoma") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) + # Class: (infectious discitis) AnnotationAssertion(rdfs:label "infectious discitis") @@ -261334,6 +260713,11 @@ EquivalentClasses( ObjectIntersecti SubClassOf( ) SubClassOf( ) +# Class: (mature) + +AnnotationAssertion(rdfs:label "mature") +SubClassOf( ) + # Class: (1-D extent) AnnotationAssertion(rdfs:label "1-D extent") @@ -262197,6 +261581,11 @@ SubClassOf( "transversely striated") SubClassOf( ) +# Class: (single organismal process quality) + +AnnotationAssertion(rdfs:label "single organismal process quality") +SubClassOf( ) + # Class: (nucleated) AnnotationAssertion(rdfs:label "nucleated") @@ -262936,6 +262325,7 @@ SubClassOf( "phyllome") SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -262979,6 +262369,7 @@ SubClassOf( ObjectSomeValuesFrom( "A fruit (PO:0009001) may contain additional plant structures (PO:0009011) that were part of a flower (PO:0009046) and mature along with the gynoecium, such as a receptacle (PO:0009064). A fruit may develop without fertilization in cases of parthenocarpy, apomixis, or other hormone-induced conditions and may not always contain seeds (PO:0009010). When annotating to fruit (PO:0009001) that are referred to as ‘aggregate’, ‘multiple’, or ‘compound’, please annotate directly to the appropriate plant structure, such as receptacle, hypanthium (PO:0009065) or infructescence (PO:0006342). Fruits only occur in angiosperms.") AnnotationAssertion(rdfs:label "fruit") SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (plant cell) @@ -263023,6 +262414,7 @@ SubClassOf( "A seed generally develops from an ovule (PO:0020003) after fertilization, but may develop without fertilization in the case of apogamy (e.g., adventitious embryos or somatic embryos). A seed is a reproductive unit of seed plants (gymnosperms, angiosperms, and fossil pteridosperms).") AnnotationAssertion(rdfs:label "seed") SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -263082,6 +262474,7 @@ SubClassOf( ObjectSomeValuesFrom( "The characteristic reproductive structure of angiosperms. May have as part one or more petals, sepals or tepals. May contain one or more pistillode (PO:0009078), staminode (PO:0009077) or other aborted organs that don't show up in mature form.") AnnotationAssertion(rdfs:label "flower") SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stem) @@ -263095,6 +262488,7 @@ SubClassOf( "If annotating gene expression to a gynoecium with a single carpel (PO:0009030), the annotation should go on carpel. A gynoecium with two or more carpels may be either syncarpous (carpels fused) or apopcarpous (carpels free) or the carpels may be partially fused. The word pistil is used synonymously with gynoecium for a synocarpous gynoecium, and synonymously with carpel for an apocarpous gynoecium, whether it has one or more carpels. In Zea mays, gynoecia of tassel florets and of the lower florets of ear spikelets usually do not develop fully, and they are present in a rudimentary state. If you are annotating to this structure for Zea mays or other grasses, please also add an annotation to the corresponding floret type. Choose the most specific term possible from: spikelet floret (PO:0009082), ear floret (PO:0006354), lower floret of pedicellate spikelet of ear (PO:0006353), lower floret of sessile spikelet of ear (PO:0006351), upper floret of pedicellate spikelet of ear (PO:0006350), upper floret of sessile spikelet of ear (PO:0006352), tassel floret (PO:0006310), lower floret of pedicellate spikelet of tassel (PO:0006313), lower floret of sessile spikelet of tassel (PO:0006315), upper floret of pedicellate spikelet of tassel (PO:0006314), upper floret of sessile spikelet of tassel (PO:0006316).") AnnotationAssertion(rdfs:label "gynoecium") SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -263118,6 +262512,7 @@ SubClassOf( "A seed (PO:0009010) develops from a plant ovule. In angiosperms, a plant ovule is part of a plant ovary (PO:0009072). In conifers, a plant ovule is part of an ovuliferous scale (add term). If you are annotating to this structure for Zea mays or other grasses, please also add an annotation to the corresponding floret type. Choose the most specific term possible from: spikelet floret (PO:0009082), ear floret (PO:0006354), upper floret of pedicellate spikelet of ear (PO:0006350), upper floret of sessile spikelet of ear (PO:0006352).") AnnotationAssertion(rdfs:label "plant ovule") SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cotyledon) @@ -263222,6 +262617,7 @@ SubClassOf( "The transition from phyllome primordium to phyllome occurs when the first non-meristematic tissue develops begins to develop.") AnnotationAssertion(rdfs:label "phyllome primordium") SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -263283,6 +262679,7 @@ AnnotationAssertion(rdfs:comment "Fo AnnotationAssertion(rdfs:label "secondary vascular tissue") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (phyllome anlagen) @@ -464432,6 +463829,11 @@ SubClassOf( "rRNA_primary_transcript") SubClassOf( ) +# Class: (tRNA_primary_transcript) + +AnnotationAssertion(rdfs:label "tRNA_primary_transcript") +SubClassOf( ) + # Class: (mature_transcript) AnnotationAssertion(rdfs:comment "A processed transcript cannot contain introns.") @@ -464452,6 +463854,13 @@ AnnotationAssertion(rdfs:label "rRNA SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (tRNA) + +AnnotationAssertion(rdfs:comment "This term is mapped to MGED. Do not obsolete without consulting MGED ontology.") +AnnotationAssertion(rdfs:label "tRNA") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (CDS) AnnotationAssertion(rdfs:label "CDS") @@ -464620,6 +464029,12 @@ SubClassOf( "peptide_localization_signal") SubClassOf( ) +# Class: (sncRNA) + +AnnotationAssertion(rdfs:comment "Added as per request from GitHub Issue #485 (https://github.com/The-Sequence-Ontology/SO-Ontologies/issues/485)") +AnnotationAssertion(rdfs:label "sncRNA") +SubClassOf( ) + # Class: (propeptide_region_of_CDS) AnnotationAssertion( "A CDS region corresponding to a propeptide of a polypeptide.") @@ -495807,6 +495222,12 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (renal sinus) + +AnnotationAssertion(rdfs:label "renal sinus") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (pronephric proximal tubule) AnnotationAssertion(rdfs:label "pronephric proximal tubule") @@ -495816,6 +495237,13 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (pronephric sinus) + +AnnotationAssertion(rdfs:label "pronephric sinus") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (pronephric distal tubule) AnnotationAssertion(rdfs:label "pronephric distal tubule") @@ -495862,6 +495290,27 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (renal sinus of right kidney) + +AnnotationAssertion(rdfs:label "renal sinus of right kidney") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (renal sinus of left kidney) + +AnnotationAssertion(rdfs:label "renal sinus of left kidney") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (mesonephric sinus) + +AnnotationAssertion(rdfs:label "mesonephric sinus") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (inguinal ligament) AnnotationAssertion(rdfs:label "inguinal ligament") diff --git a/src/ontology/oba.Makefile b/src/ontology/oba.Makefile index 6b9eae8d..c9d32810 100644 --- a/src/ontology/oba.Makefile +++ b/src/ontology/oba.Makefile @@ -85,6 +85,7 @@ $(ONT)-full.owl: $(SRC) $(OTHER_SRC) remove --term PR:000000001 \ --term SO:0000252 \ --term SO:0000234 \ + --term SO:0000253 \ reason --reasoner ELK --equivalent-classes-allowed none --exclude-tautologies structural \ relax \ reduce -r ELK \ diff --git a/src/patterns/data/default/entity_attribute.tsv b/src/patterns/data/default/entity_attribute.tsv index 2d7c8363..927a07a9 100644 --- a/src/patterns/data/default/entity_attribute.tsv +++ b/src/patterns/data/default/entity_attribute.tsv @@ -4234,3 +4234,6 @@ OBA:2050119 gene expression attribute GO:0010467 gene expression PATO:0001236 pr OBA:2045562 evoked neurotransmitter secretion attribute GO:0061670 evoked neurotransmitter secretion PATO:0001236 process quality https://orcid.org/0000-0001-8314-2140 OBA:VT0005372 life span determination trait GO:0008340 determination of adult lifespan PATO:0001236 process quality life span trait|lifespan determination trait|life span duration trait|lifespan duration trait https://orcid.org/0000-0001-8314-2140 OBA:2090003 macula lutea attribute UBERON:0000053 macula lutea PATO:0000001 quality https://orcid.org/0000-0001-6677-8489 +OBA:2100000 kidney sinus volume UBERON:0006171 renal sinus PATO:0000918 volume PMID:41077127 https://orcid.org/0000-0001-6757-4744 +OBA:2100001 kidney medulla volume UBERON:0000362 renal medulla PATO:0000918 volume PMID:41077127 https://orcid.org/0000-0001-6757-4744 +OBA:2100002 kidney cortex volume UBERON:0001225 cortex of kidney PATO:0000918 volume PMID:41077127 https://orcid.org/0000-0001-6757-4744 diff --git a/src/patterns/definitions.owl b/src/patterns/definitions.owl index 5c6169d6..44108d16 100644 --- a/src/patterns/definitions.owl +++ b/src/patterns/definitions.owl @@ -7,8 +7,8 @@ Prefix(rdfs:=) Ontology( - -Annotation(owl:versionInfo "2025-10-07") + +Annotation(owl:versionInfo "2025-11-11") Declaration(Class()) Declaration(Class()) @@ -24352,6 +24352,9 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -40798,6 +40801,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -71710,11 +71714,11 @@ AnnotationAssertion(Annotation( "agitation behavior quality") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -# Class: (serine family amino acid metabolic process quality) +# Class: (obsolete serine family amino acid metabolic process quality) -AnnotationAssertion(Annotation( "obo:oba/patterns/entity_attribute_part_of") "The quality of a serine family amino acid metabolic process.") -AnnotationAssertion(Annotation( "obo:oba/patterns/entity_attribute_part_of") "quality of serine family amino acid metabolic process") -AnnotationAssertion(rdfs:label "serine family amino acid metabolic process quality") +AnnotationAssertion(Annotation( "obo:oba/patterns/entity_attribute_part_of") "The quality of a obsolete serine family amino acid metabolic process.") +AnnotationAssertion(Annotation( "obo:oba/patterns/entity_attribute_part_of") "quality of obsolete serine family amino acid metabolic process") +AnnotationAssertion(rdfs:label "obsolete serine family amino acid metabolic process quality") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) # Class: (epiphysis of metatarsal bone quality) @@ -72011,11 +72015,11 @@ AnnotationAssertion(Annotation( "amniotic fluid quality") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -# Class: (protein glycosylation quality) +# Class: (obsolete protein glycosylation quality) -AnnotationAssertion(Annotation( "obo:oba/patterns/entity_attribute_part_of") "The quality of a protein glycosylation.") -AnnotationAssertion(Annotation( "obo:oba/patterns/entity_attribute_part_of") "quality of protein glycosylation") -AnnotationAssertion(rdfs:label "protein glycosylation quality") +AnnotationAssertion(Annotation( "obo:oba/patterns/entity_attribute_part_of") "The quality of a obsolete protein glycosylation.") +AnnotationAssertion(Annotation( "obo:oba/patterns/entity_attribute_part_of") "quality of obsolete protein glycosylation") +AnnotationAssertion(rdfs:label "obsolete protein glycosylation quality") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) # Class: (auditory ossicle bone quality) @@ -72221,11 +72225,11 @@ AnnotationAssertion(Annotation( "mandibular ramus quality") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -# Class: (glycosylation quality) +# Class: (obsolete glycosylation quality) -AnnotationAssertion(Annotation( "obo:oba/patterns/entity_attribute_part_of") "The quality of a glycosylation.") -AnnotationAssertion(Annotation( "obo:oba/patterns/entity_attribute_part_of") "quality of glycosylation") -AnnotationAssertion(rdfs:label "glycosylation quality") +AnnotationAssertion(Annotation( "obo:oba/patterns/entity_attribute_part_of") "The quality of a obsolete glycosylation.") +AnnotationAssertion(Annotation( "obo:oba/patterns/entity_attribute_part_of") "quality of obsolete glycosylation") +AnnotationAssertion(rdfs:label "obsolete glycosylation quality") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) # Class: (vestibulocochlear nerve quality) @@ -74315,11 +74319,11 @@ AnnotationAssertion(Annotation( "proximal epiphysis of ulna quality") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -# Class: (aspartate family amino acid metabolic process quality) +# Class: (obsolete aspartate family amino acid metabolic process quality) -AnnotationAssertion(Annotation( "obo:oba/patterns/entity_attribute_part_of") "The quality of a aspartate family amino acid metabolic process.") -AnnotationAssertion(Annotation( "obo:oba/patterns/entity_attribute_part_of") "quality of aspartate family amino acid metabolic process") -AnnotationAssertion(rdfs:label "aspartate family amino acid metabolic process quality") +AnnotationAssertion(Annotation( "obo:oba/patterns/entity_attribute_part_of") "The quality of a obsolete aspartate family amino acid metabolic process.") +AnnotationAssertion(Annotation( "obo:oba/patterns/entity_attribute_part_of") "quality of obsolete aspartate family amino acid metabolic process") +AnnotationAssertion(rdfs:label "obsolete aspartate family amino acid metabolic process quality") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) # Class: (metatarsal bone of digit 1 quality) @@ -229113,6 +229117,33 @@ AnnotationAssertion(Annotation( "macula lutea attribute") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: (kidney sinus volume) + +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute") "The volume of a renal sinus.") +AnnotationAssertion( "https://orcid.org/0000-0001-6757-4744") +AnnotationAssertion( "PMID:41077127") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute") "volume of renal sinus") +AnnotationAssertion(rdfs:label "kidney sinus volume") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (kidney medulla volume) + +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute") "The volume of a renal medulla.") +AnnotationAssertion( "https://orcid.org/0000-0001-6757-4744") +AnnotationAssertion( "PMID:41077127") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute") "volume of renal medulla") +AnnotationAssertion(rdfs:label "kidney medulla volume") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (kidney cortex volume) + +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute") "The volume of a cortex of kidney.") +AnnotationAssertion( "https://orcid.org/0000-0001-6757-4744") +AnnotationAssertion( "PMID:41077127") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute") "volume of cortex of kidney") +AnnotationAssertion(rdfs:label "kidney cortex volume") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + # Class: (mammary gland secreted fluid morphology trait) AnnotationAssertion(Annotation( "obo:oba/patterns/entity_attribute_part_of") "The morphology of a mammary gland fluid/secretion.") @@ -248327,11 +248358,13 @@ SubClassOf(ObjectIntersectionOf( Ob SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( )))) SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( )))) SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( )))) +SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( )))) SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( )))) SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( )))) SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( )))) SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( )))) SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( )))) +SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( )))) SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( )))) SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( )))) SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( )))) @@ -248399,6 +248432,7 @@ SubClassOf(ObjectIntersectionOf( Ob SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( )))) SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( )))) SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( )))) +SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( )))) SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( )))) SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( )))) SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))