Version 0.7.0

Added

• explain command to show help text for common concepts (starting with the sample metadata CSV used by demux and trim) (#89)
• trim now supports custom forward and/or reverse adapter sequences (#88)
• trim now supports passing additional command-line arguments through to cutadapt (#87)

Changed

• trim now allows the species to be left unspecified and/or the Type column in the samples CSV to be missing or blank, in which case any applicable adapter sequences will be used in the cutadapt commands (#85)

Fixed

• identity now handles an optional alternate sequence ID column correctly for the reference input file (#95)
• igblast no longer hangs with empty input (#94)
• vdj-gather can handle multiple input paths with sequences for the same segment (for example, IGHV sequences from two germline references) (#93)