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Replace scRNA-seq example counts, samples, contrasts. #1617

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Merged
merged 2 commits into from
Nov 11, 2025
Merged

Replace scRNA-seq example counts, samples, contrasts. #1617

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74e4087
Replace scRNAseq example counts, samples, contrasts
zitoa Nov 10, 2025
4ef6188
put on playdata
zitoa Nov 10, 2025
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2 changes: 1 addition & 1 deletion components/board.upload/R/upload_module_preview_contrasts.R
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Original file line number Diff line number Diff line change
Expand Up @@ -371,7 +371,7 @@ upload_table_preview_contrasts_server <- function(

observeEvent(input$load_example, {
if (upload_datatype() == "scRNA-seq") {
ctx <- playbase::CONTRASTS_scRNAseq
ctx <- playbase::GSE243639_scRNAseq_contrasts
} else {
ctx <- playbase::CONTRASTS
}
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2 changes: 1 addition & 1 deletion components/board.upload/R/upload_module_preview_counts.R
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Expand Up @@ -744,7 +744,7 @@ upload_table_preview_counts_server <- function(id,
text = "Olink NPX example data not yet available. Please upload yours or change data type."
)
} else if (upload_datatype() == "scRNA-seq") {
uploaded$counts.csv <- playbase::COUNTS_scRNAseq
uploaded$counts.csv <- playbase::GSE243639_scRNAseq_counts
} else {
uploaded$counts.csv <- playbase::COUNTS
}
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2 changes: 1 addition & 1 deletion components/board.upload/R/upload_module_preview_samples.R
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Expand Up @@ -396,7 +396,7 @@ upload_table_preview_samples_server <- function(
observeEvent(input$load_example, {
df <- playbase::SAMPLES
if (upload_datatype() == "multi-omics") df <- playbase::SAMPLES_MO
if (upload_datatype() == "scRNA-seq") df <- playbase::SAMPLES_scRNAseq
if (upload_datatype() == "scRNA-seq") df <- playbase::GSE243639_scRNAseq_samples
uploaded$samples.csv <- df
loaded_samples(TRUE)
orig_sample_matrix(df)
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