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@ga4gh

Global Alliance for Genomics and Health

An international coalition, formed to enable the sharing of genomic and clinical data.

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  1. ga4gh-schemas ga4gh-schemas Public archive

    Models and APIs for Genomic data. RETIRED 2018-01-24

    Python 220 112

  2. benchmarking-tools benchmarking-tools Public

    Repository for the GA4GH Benchmarking Team work developing standardized benchmarking methods for germline small variant calls

    HTML 206 47

  3. ga4gh-server ga4gh-server Public archive

    Reference implementation of the APIs defined in ga4gh-schemas. RETIRED 2018-01-24

    Python 99 91

  4. vrs vrs Public

    Extensible specification for representing and uniquely identifying biological sequence variation

    Jupyter Notebook 94 38

  5. task-execution-schemas task-execution-schemas Public

    92 30

  6. phenopacket-schema phenopacket-schema Public

    Repository for the GA4GH phenopacket schema

    Java 91 31

Repositories

Showing 10 of 137 repositories
  • va-spec Public

    An information model for representing variant annotations.

    ga4gh/va-spec’s past year of commit activity
    Jupyter Notebook 24 Apache-2.0 6 112 (1 issue needs help) 5 Updated Nov 20, 2025
  • vrs-python Public

    GA4GH Variation Representation Python Implementation

    ga4gh/vrs-python’s past year of commit activity
    Python 60 Apache-2.0 37 63 (1 issue needs help) 9 Updated Nov 18, 2025
  • refget Public

    GA4GH Refget specifications docs

    ga4gh/refget’s past year of commit activity
    16 9 17 0 Updated Nov 12, 2025
  • TASC Public

    TASC aids the harmonisation of aspects of GA4GH's various products that would otherwise prevent different products from being used together conveniently.

    ga4gh/TASC’s past year of commit activity
    12 9 21 (1 issue needs help) 1 Updated Nov 6, 2025
  • data-repository-service-schemas Public

    A repository for the schemas used for the Data Repository Service.

    ga4gh/data-repository-service-schemas’s past year of commit activity
    63 Apache-2.0 54 70 24 Updated Nov 6, 2025
  • phenopacket-schema Public

    Repository for the GA4GH phenopacket schema

    ga4gh/phenopacket-schema’s past year of commit activity
    Java 91 BSD-3-Clause 31 29 4 Updated Nov 4, 2025
  • experiments-metadata Public

    The Experiments Metadata Standard Group focuses on defining a minimal set of metadata properties for genomic datasets, to make them usable in primarily in a discovery context.

    ga4gh/experiments-metadata’s past year of commit activity
    5 Apache-2.0 0 11 0 Updated Oct 29, 2025
  • va-spec-python Public

    GA4GH Variation Annotation Python Implementation

    ga4gh/va-spec-python’s past year of commit activity
    Python 1 Apache-2.0 2 4 1 Updated Oct 29, 2025
  • cat-vrs Public

    A terminology and data model for describing categorical variation concepts.

    ga4gh/cat-vrs’s past year of commit activity
    Makefile 4 Apache-2.0 4 19 0 Updated Oct 23, 2025
  • REWS Public

    An online repository and community gathering place for everything GA4GH Regulatory & Ethics (REWS)

    ga4gh/REWS’s past year of commit activity
    0 0 0 0 Updated Oct 23, 2025
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